[][] ath   At5g20650 Gene
functional annotation
Function   copper transporter 5 Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0015680 [list] [network] protein maturation by copper ion transfer  (1 genes)  IMP  
GO CC
GO:0005770 [list] [network] late endosome  (43 genes)  IDA  
GO:0000325 [list] [network] plant-type vacuole  (785 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  HDA  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
GO:0015089 [list] [network] high-affinity copper ion transmembrane transporter activity  (4 genes)  IGI  
GO:0005375 [list] [network] copper ion transmembrane transporter activity  (16 genes)  ISS  
KEGG
Protein NP_197565.1 
BLAST NP_197565.1 
Orthologous [Ortholog page] LOC4347173 (osa)LOC7491981 (ppo)LOC11428763 (mtr)LOC11442243 (mtr)LOC18100324 (ppo)LOC100795071 (gma)LOC100801036 (gma)LOC100805457 (gma)LOC100815028 (gma)LOC101247486 (sly)LOC103845656 (bra)LOC103851365 (bra)LOC123107058 (tae)LOC123116182 (tae)LOC123124804 (tae)LOC123397297 (hvu)
Subcellular
localization
wolf
chlo 4,  nucl 2,  chlo_mito 2,  cysk_nucl 1  (predict for NP_197565.1)
Subcellular
localization
TargetP
scret 5  (predict for NP_197565.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 4
ath00190 Oxidative phosphorylation 3
Genes directly connected with COPT5 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.7 AT1G65720 uncharacterized protein [detail] 842883
6.6 AT4G07390 Mannose-P-dolichol utilization defect 1 protein [detail] 826170
6.5 AVA-P4 vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 [detail] 843898
5.7 AT3G09085 transmembrane protein (DUF962) [detail] 820062
5.7 AT5G60460 Preprotein translocase Sec, Sec61-beta subunit protein [detail] 28721282
4.6 SIM cyclin-dependent protein kinase inhibitor [detail] 830326
3.6 AT2G37530 forkhead box protein G1 [detail] 818329
Coexpressed
gene list
[Coexpressed gene list for COPT5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245999_at
245999_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245999_at
245999_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
245999_at
245999_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 832188    
Refseq ID (protein) NP_197565.1 


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