[←][→] ath   AT5G20720 Gene
functional annotation
Function   chaperonin 20  
GO BP
GO:0051290 [list] [network] protein heterotetramerization  (1 genes)  IPI  
GO:1901671 [list] [network] positive regulation of superoxide dismutase activity  (1 genes)  IDA  
GO:0051085 [list] [network] chaperone cofactor-dependent protein refolding  (42 genes)  IBA  
GO:0009788 [list] [network] negative regulation of abscisic acid-activated signaling pathway  (54 genes)  IMP  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0009409 [list] [network] response to cold  (411 genes)  IEP  
GO CC
GO:0005759 [list] [network] mitochondrial matrix  (143 genes)  IBA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IDA  
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IBA IDA ISM ISS  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA IBA IDA  
GO MF
GO:0051087 [list] [network] chaperone binding  (37 genes)  IBA  
GO:0051082 [list] [network] unfolded protein binding  (125 genes)  IBA  
GO:0005516 [list] [network] calmodulin binding  (182 genes)  TAS  
GO:0005507 [list] [network] copper ion binding  (185 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001318614.1  NP_001331898.1  NP_197572.1  NP_851045.1 
BLAST NP_001318614.1  NP_001331898.1  NP_197572.1  NP_851045.1 
Orthologous [Ortholog page] Cpn21 (sly)  LOC4330925 (osa)  LOC4340394 (osa)  LOC4347161 (osa)  LOC7467923 (ppo)  LOC11445528 (mtr)  LOC25486536 (mtr)  LOC100191248 (zma)  LOC100216904 (zma)  LOC100232962 (vvi)  LOC100267892 (vvi)  LOC100383971 (zma)  LOC100803033 (gma)  LOC100804915 (gma)  LOC100814751 (gma)  LOC101253560 (sly)  LOC103845647 (bra)  LOC103851372 (bra)  LOC103856460 (bra) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001318614.1)
chlo 9  (predict for NP_001331898.1)
chlo 9  (predict for NP_197572.1)
chlo 9  (predict for NP_851045.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001318614.1)
chlo 9  (predict for NP_001331898.1)
chlo 9  (predict for NP_197572.1)
chlo 9  (predict for NP_851045.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath03018 RNA degradation 2
ath03040 Spliceosome 2
ath04144 Endocytosis 2
Genes directly connected with CPN20 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
16.6 CPN60A chaperonin-60alpha [detail] 817344
11.5 EMB1241 Co-chaperone GrpE family protein [detail] 831638
11.1 Cpn60beta2 TCP-1/cpn60 chaperonin family protein [detail] 820549
7.5 PPa6 pyrophosphorylase 6 [detail] 830824
Coexpressed
gene list		 [Coexpressed gene list for CPN20]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246003_at
246003_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246003_at
246003_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246003_at
246003_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832195      
Refseq ID (protein) NP_001318614.1 
NP_001331898.1 
NP_197572.1 
NP_851045.1 


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