[←][→] ath   At5g20720 Gene
functional annotation
Function   chaperonin 20    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0051290 [list] [network] protein heterotetramerization  (1 genes)  IPI  
GO:1901671 [list] [network] positive regulation of superoxide dismutase activity  (1 genes)  IDA  
GO:0009788 [list] [network] negative regulation of abscisic acid-activated signaling pathway  (60 genes)  IMP  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP  
GO CC
GO:0048046 [list] [network] apoplast  (305 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM ISS  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
GO:0005516 [list] [network] calmodulin binding  (128 genes)  TAS  
GO:0005507 [list] [network] copper ion binding  (132 genes)  HDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001318614.1  NP_001331898.1  NP_197572.1  NP_851045.1 
BLAST NP_001318614.1  NP_001331898.1  NP_197572.1  NP_851045.1 
Orthologous [Ortholog page] Cpn21 (sly)  LOC4330925 (osa)  LOC4340394 (osa)  LOC4347161 (osa)  LOC7467923 (ppo)  LOC11445528 (mtr)  LOC18100301 (ppo)  LOC25486536 (mtr)  LOC100803033 (gma)  LOC100804915 (gma)  LOC100814751 (gma)  LOC100817115 (gma)  LOC101253560 (sly)  LOC103845647 (bra)  LOC103851372 (bra)  LOC103856460 (bra)  LOC123103765 (tae)  LOC123111984 (tae)  LOC123138530 (tae)  LOC123145770 (tae)  LOC123149355 (tae)  LOC123157211 (tae)  LOC123165380 (tae)  LOC123397532 (hvu)  LOC123402890 (hvu)  LOC123407855 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001318614.1)
chlo 9  (predict for NP_001331898.1)
chlo 9  (predict for NP_197572.1)
chlo 9  (predict for NP_851045.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001318614.1)
chlo 9  (predict for NP_001331898.1)
chlo 9  (predict for NP_197572.1)
chlo 9  (predict for NP_851045.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath03018 RNA degradation 2
ath03010 Ribosome 2
ath03040 Spliceosome 2
ath04144 Endocytosis 2
Genes directly connected with CPN20 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
18.4 CPN60A chaperonin-60alpha [detail] 817344
11.6 Cpn60beta2 TCP-1/cpn60 chaperonin family protein [detail] 820549
11.6 cpHsc70-1 chloroplast heat shock protein 70-1 [detail] 828531
9.9 EMB1241 Co-chaperone GrpE family protein [detail] 831638
Coexpressed
gene list		 [Coexpressed gene list for CPN20]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246003_at
246003_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246003_at
246003_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246003_at
246003_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832195      
Refseq ID (protein) NP_001318614.1 
NP_001331898.1 
NP_197572.1 
NP_851045.1 


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