[←][→] ath   At5g20980 Gene
functional annotation
Function   methionine synthase 3  
GO BP
GO:0009086 [list] [network] methionine biosynthetic process  (14 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO MF
GO:0003871 [list] [network] 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity  (3 genes)  IEA  
GO:0008705 [list] [network] methionine synthase activity  (3 genes)  IDA  
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
KEGG ath00270 [list] [network] Cysteine and methionine metabolism (124 genes)
ath00450 [list] [network] Selenocompound metabolism (18 genes)
ath01230 [list] [network] Biosynthesis of amino acids (244 genes)
Protein NP_001078611.1  NP_197598.2 
BLAST NP_001078611.1  NP_197598.2 
Orthologous [Ortholog page] LOC547643 (gma)  MS2 (ath)  ATMS1 (ath)  LOC4352832 (osa)  LOC4352833 (osa)  LOC7478605 (ppo)  LOC7482366 (ppo)  LOC7491056 (ppo)  LOC11439549 (mtr)  LOC11442193 (mtr)  LOC18098013 (ppo)  LOC25495847 (mtr)  LOC100775388 (gma)  LOC100776541 (gma)  LOC100779947 (gma)  LOC100802039 (gma)  LOC100807833 (gma)  LOC100811317 (gma)  LOC101250617 (sly)  ER69 (sly)  LOC103845623 (bra)  LOC103845887 (bra)  LOC103851137 (bra)  LOC103856274 (bra)  LOC103856476 (bra)  LOC103859011 (bra)  LOC112323225 (ppo)  LOC123087362 (tae)  LOC123090570 (tae)  LOC123095612 (tae)  LOC123102066 (tae)  LOC123110172 (tae)  LOC123119218 (tae)  LOC123397666 (hvu)  LOC123446921 (hvu) 
Subcellular
localization
wolf
chlo 5,  mito 5,  chlo_mito 5  (predict for NP_001078611.1)
chlo 5,  mito 5,  chlo_mito 5  (predict for NP_197598.2)
Subcellular
localization
TargetP
chlo 8,  mito 7  (predict for NP_001078611.1)
chlo 8,  mito 7  (predict for NP_197598.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
ath01230 Biosynthesis of amino acids 4
ath01240 Biosynthesis of cofactors 3
ath03040 Spliceosome 2
ath00250 Alanine, aspartate and glutamate metabolism 2
Genes directly connected with MS3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.1 PUR4 purine biosynthesis 4 [detail] 843766
5.6 emb1027 Arginyl-tRNA synthetase, class Ic [detail] 828736
5.6 TOC75-III translocon at the outer envelope membrane of chloroplasts 75-III [detail] 823827
Coexpressed
gene list		 [Coexpressed gene list for MS3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246185_at
246185_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246185_at
246185_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246185_at
246185_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832223      
Refseq ID (protein) NP_001078611.1 
NP_197598.2 


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