[←][→] ath   AT5G24160 Gene
functional annotation
Function   squalene monooxygenase 6  
GO BP
GO:0016126 [list] [network] sterol biosynthetic process  (37 genes)  IBA TAS  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IBA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
GO:0004506 [list] [network] squalene monooxygenase activity  (7 genes)  IBA  
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (147 genes)  IEA  
KEGG ath00100 [list] [network] Steroid biosynthesis (35 genes)
ath00909 [list] [network] Sesquiterpenoid and triterpenoid biosynthesis (23 genes)
Protein NP_001330190.1  NP_001330191.1  NP_197804.1 
BLAST NP_001330190.1  NP_001330191.1  NP_197804.1 
Orthologous [Ortholog page] SQP1 (ath)  LOC103865842 (bra) 
Subcellular
localization
wolf
cyto 4,  E.R. 3,  chlo 1,  E.R._vacu 1  (predict for NP_001330190.1)
plas 6,  vacu 2,  cyto 1,  golg 1  (predict for NP_001330191.1)
plas 7,  vacu 2  (predict for NP_197804.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_001330190.1)
scret 9  (predict for NP_001330191.1)
scret 9  (predict for NP_197804.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
ath00100 Steroid biosynthesis 2
ath00909 Sesquiterpenoid and triterpenoid biosynthesis 2
Genes directly connected with SQE6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 AT5G24155 FAD/NAD(P)-binding oxidoreductase family protein [detail] 832481
5.0 CYP71B3 cytochrome P450, family 71, subfamily B, polypeptide 3 [detail] 822223
5.0 SCPL7 serine carboxypeptidase-like 7 [detail] 820209
4.7 AT2G29340 NAD-dependent epimerase/dehydratase family protein [detail] 817483
Coexpressed
gene list		 [Coexpressed gene list for SQE6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249775_at
249775_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249775_at
249775_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249775_at
249775_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832482      
Refseq ID (protein) NP_001330190.1 
NP_001330191.1 
NP_197804.1 


The preparation time of this page was 0.2 [sec].