[][] ath   AT5G24530 Gene
functional annotation
Function   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
GO BP
GO:0009813 [list] [network] flavonoid biosynthetic process  (58 genes)  IDA  
GO:0002229 [list] [network] defense response to oomycetes  (67 genes)  IMP  
GO:0002239 [list] [network] response to oomycetes  (88 genes)  IEP IMP  
GO:0010150 [list] [network] leaf senescence  (111 genes)  IMP  
GO:0009751 [list] [network] response to salicylic acid  (215 genes)  IEP  
GO:0071456 [list] [network] cellular response to hypoxia  (238 genes)  HEP  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IMP  
GO:0009617 [list] [network] response to bacterium  (479 genes)  IEP IGI IMP  
GO:0009620 [list] [network] response to fungus  (595 genes)  IEP IGI IMP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0033759 [list] [network] flavone synthase activity  (1 genes)  IDA  
GO:0034785 [list] [network] salicylate 5-hydroxylase activity  (1 genes)  IDA  
GO:0051213 [list] [network] dioxygenase activity  (147 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_197841.1 
BLAST NP_197841.1 
Orthologous [Ortholog page] LOC4331443 (osa)LOC4336764 (osa)LOC4349238 (osa)LOC11425208 (mtr)LOC100254096 (vvi)LOC100284800 (zma)DMR6-1 (sly)LOC100782253 (gma)LOC100805464 (gma)LOC100854106 (vvi)LOC101257381 (sly)LOC103642860 (zma)LOC103835519 (bra)LOC103854853 (bra)LOC103874321 (bra)
Subcellular
localization
wolf
chlo 3,  mito 2,  cyto_mito 1,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_197841.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for NP_197841.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with DMR6 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.0 AT4G10500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 826642
6.1 WRKY54 WRKY DNA-binding protein 54 [detail] 818670
6.1 WRKY38 WRKY DNA-binding protein 38 [detail] 832320
5.7 AT1G34420 leucine-rich repeat transmembrane protein kinase family protein [detail] 840345
4.5 GRXS13 Glutaredoxin family protein [detail] 839392
Coexpressed
gene list
[Coexpressed gene list for DMR6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249754_at
249754_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249754_at
249754_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
249754_at
249754_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 832524    
Refseq ID (protein) NP_197841.1 


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