[←][→] ath   AT5G24620 Gene
functional annotation
Function   Pathogenesis-related thaumatin superfamily protein  
GO BP
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO MF
KEGG
Protein NP_001190385.1  NP_001332412.1  NP_001332413.1  NP_197850.2 
BLAST NP_001190385.1  NP_001332412.1  NP_001332413.1  NP_197850.2 
Orthologous [Ortholog page] LOC7474073 (ppo)  LOC7486703 (ppo)  LOC100246972 (vvi)  LOC100790173 (gma)  LOC100805642 (gma)  LOC101256565 (sly)  LOC101259255 (sly)  LOC103647557 (zma)  LOC103655253 (zma)  LOC103874328 (bra)  LOC106798928 (gma)  LOC107278231 (osa)  LOC108868756 (bra)  LOC112421837 (mtr) 
Subcellular
localization
wolf
chlo 6,  nucl 1,  mito 1,  plas 1,  vacu 1,  cyto_nucl 1,  cysk_nucl 1,  mito_plas 1  (predict for NP_001190385.1)
chlo 9,  cyto 1,  extr 1  (predict for NP_001332412.1)
chlo 7,  vacu 1,  nucl 1,  extr 1,  E.R._vacu 1  (predict for NP_001332413.1)
chlo 6,  extr 2,  vacu 1  (predict for NP_197850.2)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for NP_001190385.1)
mito 3,  scret 3  (predict for NP_001332412.1)
other 2  (predict for NP_001332413.1)
scret 9  (predict for NP_197850.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
Genes directly connected with AT5G24620 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 RIK RS2-interacting KH protein [detail] 822600
5.7 AT1G70620 cyclin-like protein [detail] 843399
5.6 ATU2AF65A U2 snRNP auxilliary factor, large subunit, splicing factor [detail] 829822
5.0 AT5G24610 cyclic AMP-responsive element-binding protein [detail] 832532
Coexpressed
gene list		 [Coexpressed gene list for AT5G24620]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249748_at
249748_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249748_at
249748_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249748_at
249748_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832533      
Refseq ID (protein) NP_001190385.1 
NP_001332412.1 
NP_001332413.1 
NP_197850.2 


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