[←][→] ath   At5g24660 Gene
functional annotation
Function   response to low sulfur 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010438 [list] [network] cellular response to sulfur starvation  (12 genes)  IEP  
GO:0098869 [list] [network] cellular oxidant detoxification  (24 genes)  IEA  
GO:0002229 [list] [network] defense response to oomycetes  (46 genes)  IMP  
GO:0047484 [list] [network] regulation of response to osmotic stress  (47 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IMP  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (272 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (607 genes)  IEP  
GO:0031347 [list] [network] regulation of defense response  (749 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_197854.1 
BLAST NP_197854.1 
Orthologous [Ortholog page] LSU3 (ath)  LSU1 (ath)  LSU4 (ath)  LOC4328185 (osa)  LOC4349083 (osa)  LOC7464483 (ppo)  LOC7486705 (ppo)  LOC9269286 (osa)  LOC11424580 (mtr)  LOC100804573 (gma)  LOC100813653 (gma)  LOC100820369 (gma)  LOC101243684 (sly)  LOC101243970 (sly)  LOC101259547 (sly)  LOC101268660 (sly)  LOC103854791 (bra)  LOC103873047 (bra)  LOC103873048 (bra)  LOC103874333 (bra)  LOC123048673 (tae)  LOC123056943 (tae)  LOC123124800 (tae)  LOC123130260 (tae)  LOC123133695 (tae)  LOC123138931 (tae)  LOC123141067 (tae)  LOC123168116 (tae)  LOC123402564 (hvu)  LOC123434448 (hvu) 
Subcellular
localization
wolf
chlo 5,  nucl_plas 2,  nucl 1,  mito 1,  plas 1  (predict for NP_197854.1)
Subcellular
localization
TargetP
other 7  (predict for NP_197854.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00920 Sulfur metabolism 4
ath00270 Cysteine and methionine metabolism 2
ath01200 Carbon metabolism 2
ath01230 Biosynthesis of amino acids 2
ath00260 Glycine, serine and threonine metabolism 2
Genes directly connected with LSU2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
16.9 AT1G04770 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 839418
15.4 LSU1 response to low sulfur 1 [detail] 824120
14.9 ATSDI1 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 834943
10.2 LSU4 response to low sulfur 4 [detail] 832537
Coexpressed
gene list		 [Coexpressed gene list for LSU2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249752_at
249752_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249752_at
249752_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249752_at
249752_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832538      
Refseq ID (protein) NP_197854.1 


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