[←][→] ath   At5g24670 Gene
functional annotation
Function   Cytidine/deoxycytidylate deaminase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006400 [list] [network] tRNA modification  (36 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0008251 [list] [network] tRNA-specific adenosine deaminase activity  (6 genes)  IMP  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
GO:0003824 [list] [network] catalytic activity  (5771 genes)  IEA  
KEGG
Protein NP_001190386.1  NP_001318639.1  NP_001318640.1  NP_001330739.1  NP_197855.3 
BLAST NP_001190386.1  NP_001318639.1  NP_001318640.1  NP_001330739.1  NP_197855.3 
Orthologous [Ortholog page] LOC4346442 (osa)  LOC11416732 (mtr)  LOC18104268 (ppo)  LOC100789556 (gma)  LOC101264494 (sly)  LOC103830853 (bra)  LOC123070346 (tae)  LOC123088043 (tae)  LOC123103322 (tae)  LOC123120744 (tae)  LOC123169188 (tae)  LOC123396021 (hvu) 
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for NP_001190386.1)
nucl 9,  cyto 1  (predict for NP_001318639.1)
nucl 9,  cyto 1  (predict for NP_001318640.1)
nucl 9,  cyto 1  (predict for NP_001330739.1)
nucl 9,  cyto 1  (predict for NP_197855.3)
Subcellular
localization
TargetP
other 9  (predict for NP_001190386.1)
other 8  (predict for NP_001318639.1)
other 9  (predict for NP_001318640.1)
other 8  (predict for NP_001330739.1)
other 8  (predict for NP_197855.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
Genes directly connected with EMB2820 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.6 AT4G36980 CLK4-associating serine/arginine-rich protein [detail] 829852
11.3 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein [detail] 832631
10.5 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily protein [detail] 835932
9.0 AT1G27520 Glycosyl hydrolase family 47 protein [detail] 839643
8.2 AT3G57470 Insulinase (Peptidase family M16) family protein [detail] 824914
5.4 AT1G01448 [detail] 5007657
5.2 AT4G16765 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 827382
5.2 AT5G27730 heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) [detail] 832835
Coexpressed
gene list		 [Coexpressed gene list for EMB2820]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246957_at
246957_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246957_at
246957_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246957_at
246957_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832539      
Refseq ID (protein) NP_001190386.1 
NP_001318639.1 
NP_001318640.1 
NP_001330739.1 
NP_197855.3 


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