[←][→] ath   At5g24850 Gene
functional annotation
Function   cryptochrome 3    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0000719 [list] [network] photoreactive repair  (4 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
GO:0003913 [list] [network] DNA photolyase activity  (4 genes)  IDA  
GO:0010181 [list] [network] FMN binding  (20 genes)  IDA  
GO:0003677 [list] [network] DNA binding  (1277 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_568461.3 
BLAST NP_568461.3 
Orthologous [Ortholog page] LOC4341749 (osa)  LOC11427347 (mtr)  LOC18100781 (ppo)  LOC100783312 (gma)  Cry3 (sly)  LOC103837069 (bra)  LOC103874351 (bra)  LOC123149308 (tae)  LOC123157423 (tae)  LOC123164714 (tae)  LOC123413527 (hvu) 
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 1,  cyto_nucl 1,  nucl_plas 1  (predict for NP_568461.3)
Subcellular
localization
TargetP
mito 7,  chlo 6  (predict for NP_568461.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
ath03018 RNA degradation 2
ath00941 Flavonoid biosynthesis 2
ath00940 Phenylpropanoid biosynthesis 2
Genes directly connected with CRY3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.4 AT2G25530 AFG1-like ATPase family protein [detail] 817091
9.3 PHR1 photolyase 1 [detail] 837792
9.1 UGT78D2 UDP-glucosyl transferase 78D2 [detail] 831568
7.9 ELIP2 Chlorophyll A-B binding family protein [detail] 827119
6.3 AT1G47530 MATE efflux family protein [detail] 841162
4.6 AT2G46420 helicase with zinc finger protein [detail] 819250
Coexpressed
gene list		 [Coexpressed gene list for CRY3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246966_at
246966_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246966_at
246966_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246966_at
246966_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832554      
Refseq ID (protein) NP_568461.3 


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