[←][→] ath   At5g25590 Gene
functional annotation
Function   DNA ligase (DUF630 and DUF632)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048532 [list] [network] anatomical structure arrangement  (105 genes)  IEA  
GO:0031324 [list] [network] negative regulation of cellular metabolic process  (458 genes)  IEA  
GO:0010604 [list] [network] positive regulation of macromolecule metabolic process  (462 genes)  IEA  
GO:0048366 [list] [network] leaf development  (465 genes)  IEA  
GO:0048522 [list] [network] positive regulation of cellular process  (856 genes)  IEA  
GO:0050793 [list] [network] regulation of developmental process  (1250 genes)  IEA  
GO:0010154 [list] [network] fruit development  (1349 genes)  IEA  
GO:0009888 [list] [network] tissue development  (1806 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_197941.1 
BLAST NP_197941.1 
Orthologous [Ortholog page] AT1G52320 (ath)  LOC4338698 (osa)  LOC4342713 (osa)  LOC7458983 (ppo)  LOC7471548 (ppo)  LOC7473033 (ppo)  LOC7483518 (ppo)  LOC9270392 (osa)  LOC11418146 (mtr)  LOC11432502 (mtr)  LOC11433060 (mtr)  LOC100780700 (gma)  LOC100791852 (gma)  LOC100807189 (gma)  LOC100807597 (gma)  LOC101250783 (sly)  LOC101255018 (sly)  LOC103871216 (bra)  LOC103874418 (bra)  LOC123044101 (tae)  LOC123051985 (tae)  LOC123054695 (tae)  LOC123061253 (tae)  LOC123069911 (tae)  LOC123078317 (tae)  LOC123131638 (tae)  LOC123187851 (tae)  LOC123425180 (hvu)  LOC123442134 (hvu)  LOC123443605 (hvu) 
Subcellular
localization
wolf
nucl 7,  cyto 3  (predict for NP_197941.1)
Subcellular
localization
TargetP
other 8  (predict for NP_197941.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G25590 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.3 AT4G14200 Pentatricopeptide repeat (PPR) superfamily protein [detail] 827060
6.0 AT5G51560 Leucine-rich repeat protein kinase family protein [detail] 835230
5.9 AT5G48360 Actin-binding FH2 (formin homology 2) family protein [detail] 834889
5.1 AT1G03270 CBS domain protein with a domain protein (DUF21) [detail] 838595
4.9 HVA22H HVA22-like protein H (ATHVA22H) [detail] 838584
4.9 AT1G20870 HSP20-like chaperones superfamily protein [detail] 838680
4.9 AT1G27120 Galactosyltransferase family protein [detail] 839601
4.4 FP3 farnesylated protein 3 [detail] 836472
Coexpressed
gene list		 [Coexpressed gene list for AT5G25590]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246899_at
246899_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246899_at
246899_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246899_at
246899_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832634      
Refseq ID (protein) NP_197941.1 


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