[←][→] ath   AT5G26040 Gene
functional annotation
Function   histone deacetylase 2  
GO BP
GO:0016575 [list] [network] histone deacetylation  (33 genes)  ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0032041 [list] [network] NAD-dependent histone deacetylase activity (H3-K14 specific)  (12 genes)  IEA  
GO:0004407 [list] [network] histone deacetylase activity  (35 genes)  ISS  
KEGG
Protein NP_568480.2  NP_851078.1 
BLAST NP_568480.2  NP_851078.1 
Orthologous [Ortholog page] LOC4341352 (osa)  LOC11414514 (mtr)  LOC100264550 (vvi)  LOC100277470 (zma)  HDA18 (gma)  LOC101261348 (sly)  LOC103874443 (bra) 
Subcellular
localization
wolf
chlo 6,  cyto 1,  extr 1  (predict for NP_568480.2)
chlo 6,  cyto 1,  extr 1  (predict for NP_851078.1)
Subcellular
localization
TargetP
other 5  (predict for NP_568480.2)
other 5  (predict for NP_851078.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
Genes directly connected with HDA2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.4 HSF3 heat shock factor 3 [detail] 831545
5.1 CYCT1;3 cyclin T 1;3 [detail] 839655
5.0 UPS5 ureide permease 5 [detail] 839185
Coexpressed
gene list		 [Coexpressed gene list for HDA2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246881_at
246881_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246881_at
246881_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246881_at
246881_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832673      
Refseq ID (protein) NP_568480.2 
NP_851078.1 


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