[][] ath   At5g27700 Gene
functional annotation
Function   Ribosomal protein S21e Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0006412 [list] [network] translation  (911 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (93 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  IDA  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
KEGG ath03010 [list] [network] Ribosome (359 genes)
Protein NP_198122.4 
BLAST NP_198122.4 
Orthologous [Ortholog page] AT3G53890 (ath)LOC4332813 (osa)LOC4333672 (osa)LOC7481738 (ppo)LOC11435884 (mtr)LOC18098676 (ppo)LOC25488134 (mtr)LOC100499937 (gma)LOC100780867 (gma)LOC100817753 (gma)LOC101244950 (sly)LOC101245249 (sly)LOC101254027 (sly)LOC103829952 (bra)LOC103841308 (bra)LOC103854669 (bra)LOC103863277 (bra)LOC103874516 (bra)LOC103875414 (bra)LOC123043764 (tae)LOC123051623 (tae)LOC123085849 (tae)LOC123091976 (tae)LOC123097498 (tae)LOC123187557 (tae)LOC123424781 (hvu)LOC123448626 (hvu)
Subcellular
localization
wolf
mito 6,  chlo 2,  nucl 1  (predict for NP_198122.4)
Subcellular
localization
TargetP
other 8  (predict for NP_198122.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
Genes directly connected with AT5G27700 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
16.3 RS27A ribosomal protein S27 [detail] 825283
14.3 AT3G59540 Ribosomal L38e protein family [detail] 825123
14.2 RPS18C S18 ribosomal protein [detail] 826569
11.4 NOP10 nucleolar RNA-binding Nop10p family protein [detail] 816569
8.6 AT1G20430 uncharacterized protein [detail] 838631
7.3 SUMO2 small ubiquitin-like modifier 2 [detail] 835609
Coexpressed
gene list
[Coexpressed gene list for AT5G27700]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246747_at
246747_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246747_at
246747_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
246747_at
246747_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 832832    
Refseq ID (protein) NP_198122.4 


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