[←][→] ath   AT5G27700 Gene
functional annotation
Function   Ribosomal protein S21e  
GO BP
GO:0000461 [list] [network] endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (2 genes)  IBA  
GO:0000447 [list] [network] endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (4 genes)  IBA  
GO:0006412 [list] [network] translation  (1149 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (110 genes)  IBA IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (248 genes)  IBA  
KEGG ath03010 [list] [network] Ribosome (356 genes)
Protein NP_198122.4 
BLAST NP_198122.4 
Orthologous [Ortholog page] LOC542449 (zma)  LOC542458 (zma)  AT3G53890 (ath)  LOC4333672 (osa)  LOC25488134 (mtr)  LOC100246017 (vvi)  LOC100266516 (vvi)  LOC100499937 (gma)  LOC100817753 (gma)  LOC101244950 (sly)  LOC101245249 (sly)  LOC101254027 (sly)  LOC103837171 (bra)  LOC103841308 (bra)  LOC103854669 (bra)  LOC103863277 (bra)  LOC103874516 (bra)  LOC109940214 (zma) 
Subcellular
localization
wolf
mito 6,  chlo 2,  nucl 1  (predict for NP_198122.4)
Subcellular
localization
TargetP
other 8  (predict for NP_198122.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
Genes directly connected with AT5G27700 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.6 RS27A ribosomal protein S27 [detail] 825283
12.8 RPS18C S18 ribosomal protein [detail] 826569
12.5 AT1G01100 60S acidic ribosomal protein family [detail] 839410
9.9 NOP10 nucleolar RNA-binding Nop10p family protein [detail] 816569
8.8 AT1G20430 hypothetical protein [detail] 838631
7.3 SUMO2 small ubiquitin-like modifier 2 [detail] 835609
Coexpressed
gene list		 [Coexpressed gene list for AT5G27700]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246747_at
246747_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246747_at
246747_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246747_at
246747_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832832      
Refseq ID (protein) NP_198122.4 


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