[←][→] ath   AT5G28050 Gene
functional annotation
Function   Cytidine/deoxycytidylate deaminase family protein  
GO BP
GO:0006152 [list] [network] purine nucleoside catabolic process  (5 genes)  IDA IMP  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA ISM  
GO MF
GO:0047974 [list] [network] guanosine deaminase activity  (2 genes)  IDA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG
Protein NP_001031959.1  NP_001330272.1  NP_198157.1 
BLAST NP_001031959.1  NP_001330272.1  NP_198157.1 
Orthologous [Ortholog page] AT3G05300 (ath)  LOC4334690 (osa)  LOC4342824 (osa)  LOC7496489 (ppo)  LOC11407974 (mtr)  LOC11408453 (mtr)  LOC11423855 (mtr)  LOC100037792 (zma)  LOC100037793 (zma)  LOC100248555 (vvi)  LOC100272576 (zma)  LOC100305493 (gma)  LOC100500436 (gma)  LOC100527067 (gma)  LOC100816644 (gma)  LOC100820230 (gma)  LOC101244906 (sly)  LOC103859090 (bra)  LOC103874566 (bra) 
Subcellular
localization
wolf
mito 5,  cyto 3,  chlo 2  (predict for NP_001031959.1)
mito 7,  chlo 3  (predict for NP_001330272.1)
cyto 9  (predict for NP_198157.1)
Subcellular
localization
TargetP
other 5,  mito 3,  scret 3  (predict for NP_001031959.1)
scret 5  (predict for NP_001330272.1)
other 9  (predict for NP_198157.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 6
ath01210 2-Oxocarboxylic acid metabolism 4
ath01230 Biosynthesis of amino acids 4
ath00020 Citrate cycle (TCA cycle) 3
ath00630 Glyoxylate and dicarboxylate metabolism 3
Genes directly connected with AT5G28050 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.6 ASP3 aspartate aminotransferase 3 [detail] 831024
4.5 CDPK2 calcium-dependent protein kinase 2 [detail] 840471
4.4 AT5G10460 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 830910
Coexpressed
gene list		 [Coexpressed gene list for AT5G28050]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246702_at
246702_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246702_at
246702_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246702_at
246702_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 832875      
Refseq ID (protein) NP_001031959.1 
NP_001330272.1 
NP_198157.1 


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