[←][→] ath   At5g33290 Gene
functional annotation
Function   xylogalacturonan deficient 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010398 [list] [network] xylogalacturonan metabolic process  (1 genes)  IMP  
GO:0045489 [list] [network] pectin biosynthetic process  (63 genes)  IMP  
GO:0006486 [list] [network] protein glycosylation  (119 genes)  IEA  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (268 genes)  HDA  
GO:0005768 [list] [network] endosome  (350 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0102983 [list] [network] xylogalacturonan beta-1,3-xylosyltransferase activity  (1 genes)  IEA  
GO:0035252 [list] [network] UDP-xylosyltransferase activity  (9 genes)  IDA  
KEGG
Protein NP_198314.2 
BLAST NP_198314.2 
Orthologous [Ortholog page] AT3G42180 (ath)  AT5G11130 (ath)  AT5G20260 (ath)  LOC7458380 (ppo)  LOC7474668 (ppo)  LOC7474670 (ppo)  LOC11440675 (mtr)  LOC11442877 (mtr)  LOC18099922 (ppo)  LOC18099923 (ppo)  LOC18111091 (ppo)  LOC18111092 (ppo)  LOC18111093 (ppo)  LOC100779495 (gma)  LOC100780035 (gma)  LOC100780563 (gma)  LOC100781105 (gma)  LOC100800373 (gma)  LOC100803668 (gma)  LOC100804723 (gma)  LOC100816304 (gma)  LOC101245332 (sly)  LOC101257934 (sly)  LOC103833750 (bra)  LOC103842487 (bra)  LOC103845693 (bra)  LOC103846751 (bra)  LOC103850754 (bra)  LOC107276370 (osa)  LOC123137454 (tae)  LOC123144810 (tae) 
Subcellular
localization
wolf
chlo 4,  mito 2,  vacu 2,  nucl 1,  extr 1  (predict for NP_198314.2)
Subcellular
localization
TargetP
scret 1  (predict for NP_198314.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
Genes directly connected with XGD1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.1 BEL1 POX (plant homeobox) family protein [detail] 834143
5.5 AT1G76520 Auxin efflux carrier family protein [detail] 843985
5.0 TGA7 bZIP transcription factor family protein [detail] 844127
4.8 AT1G22180 Sec14p-like phosphatidylinositol transfer family protein [detail] 838823
Coexpressed
gene list		 [Coexpressed gene list for XGD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246682_at
246682_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246682_at
246682_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246682_at
246682_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833302      
Refseq ID (protein) NP_198314.2 


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