[←][→] ath   AT5G35910 Gene
functional annotation
Function   Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein  
GO BP
GO:0071036 [list] [network] nuclear polyadenylation-dependent snoRNA catabolic process  (1 genes)  IBA  
GO:0071037 [list] [network] nuclear polyadenylation-dependent snRNA catabolic process  (1 genes)  IBA  
GO:0071039 [list] [network] nuclear polyadenylation-dependent CUT catabolic process  (1 genes)  IBA  
GO:0071040 [list] [network] nuclear polyadenylation-dependent antisense transcript catabolic process  (1 genes)  IBA  
GO:0071044 [list] [network] histone mRNA catabolic process  (2 genes)  IBA  
GO:1902466 [list] [network] positive regulation of histone H3-K27 trimethylation  (2 genes)  IMP  
GO:0071048 [list] [network] nuclear retention of unspliced pre-mRNA at the site of transcription  (3 genes)  IBA  
GO:0071038 [list] [network] nuclear polyadenylation-dependent tRNA catabolic process  (7 genes)  IBA  
GO:0071051 [list] [network] polyadenylation-dependent snoRNA 3'-end processing  (7 genes)  IBA  
GO:0000467 [list] [network] exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (8 genes)  IBA  
GO:0043633 [list] [network] polyadenylation-dependent RNA catabolic process  (9 genes)  IMP  
GO:0071035 [list] [network] nuclear polyadenylation-dependent rRNA catabolic process  (9 genes)  IBA  
GO:0080188 [list] [network] RNA-directed DNA methylation  (20 genes)  IMP  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IMP  
GO CC
GO:0000176 [list] [network] nuclear exosome (RNase complex)  (13 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0000175 [list] [network] 3'-5'-exoribonuclease activity  (32 genes)  IBA  
GO:0003727 [list] [network] single-stranded RNA binding  (64 genes)  IBA  
GO:0000166 [list] [network] nucleotide binding  (2618 genes)  IEA  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_198440.2 
BLAST NP_198440.2 
Orthologous [Ortholog page] AT1G54440 (ath)  LOC4331677 (osa)  LOC9270208 (osa)  LOC11432643 (mtr)  LOC25495837 (mtr)  LOC100265580 (vvi)  LOC100383056 (zma)  LOC100384536 (zma)  LOC100800470 (gma)  LOC100804872 (gma)  LOC100815329 (gma)  LOC100819332 (gma)  LOC101243936 (sly)  LOC103628557 (zma)  LOC103642577 (zma)  LOC103844335 (bra)  LOC103868297 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_198440.2)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for NP_198440.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
Genes directly connected with AT5G35910 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.0 AT3G16840 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 820937
8.3 AT2G34357 ARM repeat superfamily protein [detail] 2745580
7.9 AT1G69070 nucleolar-like protein [detail] 843239
6.3 AT1G54380 spliceosome protein-like protein [detail] 841879
Coexpressed
gene list		 [Coexpressed gene list for AT5G35910]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249672_at
249672_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249672_at
249672_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249672_at
249672_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833577      
Refseq ID (protein) NP_198440.2 


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