[←][→] ath   At5g37370 Gene
functional annotation
Function   PRP38 family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010226 [list] [network] response to lithium ion  (5 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (607 genes)  IGI IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_001154753.1  NP_001190430.1  NP_001318686.1  NP_001330325.1  NP_001330326.1  NP_001330327.1  NP_001330328.1  NP_001330329.1  NP_001330330.1  NP_001330331.1  NP_198553.2  NP_851101.1 
BLAST NP_001154753.1  NP_001190430.1  NP_001318686.1  NP_001330325.1  NP_001330326.1  NP_001330327.1  NP_001330328.1  NP_001330329.1  NP_001330330.1  NP_001330331.1  NP_198553.2  NP_851101.1 
Orthologous [Ortholog page] LOC4337972 (osa)  LOC7494516 (ppo)  LOC11436892 (mtr)  LOC18106495 (ppo)  LOC100788237 (gma)  LOC100793812 (gma)  LOC101266210 (sly)  LOC103863710 (bra)  LOC107281411 (osa)  LOC123040638 (tae)  LOC123087983 (tae)  LOC123148197 (tae)  LOC123164503 (tae)  LOC123180693 (tae)  LOC123407023 (hvu)  LOC123426779 (hvu) 
Subcellular
localization
wolf
cyto 5,  cyto_E.R. 3,  cysk 1,  nucl 1,  mito 1,  extr 1,  golg 1,  cysk_plas 1  (predict for NP_001154753.1)
chlo 7,  nucl 2  (predict for NP_001190430.1)
cyto 5,  cyto_E.R. 3,  cysk 1,  nucl 1,  mito 1,  extr 1,  golg 1,  cysk_plas 1  (predict for NP_001318686.1)
cyto 8,  nucl 1,  extr 1,  cysk 1,  cysk_nucl 1  (predict for NP_001330325.1)
nucl 9  (predict for NP_001330326.1)
nucl 9  (predict for NP_001330327.1)
nucl 9  (predict for NP_001330328.1)
cyto 8,  nucl 1,  extr 1,  cysk 1,  cysk_nucl 1  (predict for NP_001330329.1)
cyto 5,  cyto_E.R. 3,  nucl 2,  extr 1,  cysk_nucl 1  (predict for NP_001330330.1)
cyto 5,  cyto_E.R. 3,  nucl 2,  extr 1,  cysk_nucl 1  (predict for NP_001330331.1)
nucl 10  (predict for NP_198553.2)
nucl 10  (predict for NP_851101.1)
Subcellular
localization
TargetP
other 7,  scret 3  (predict for NP_001154753.1)
mito 7  (predict for NP_001190430.1)
other 7,  scret 3  (predict for NP_001318686.1)
other 7,  scret 3  (predict for NP_001330325.1)
other 2  (predict for NP_001330326.1)
other 2  (predict for NP_001330327.1)
other 2  (predict for NP_001330328.1)
other 7,  scret 3  (predict for NP_001330329.1)
other 7  (predict for NP_001330330.1)
other 7  (predict for NP_001330331.1)
other 8,  scret 3  (predict for NP_198553.2)
other 8,  scret 3  (predict for NP_851101.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with ATSRL1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.3 U1-70K U1 small nuclear ribonucleoprotein-70K [detail] 824230
9.3 AT2G01100 FAM133-like protein [detail] 814639
8.6 RIK RS2-interacting KH protein [detail] 822600
7.8 EML1 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein [detail] 820389
7.5 AT3G52030 F-box family protein with WD40/YVTN repeat doamin [detail] 824366
7.4 EML3 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein [detail] 831142
7.3 YY1 zinc finger (C2H2 type) family protein [detail] 826093
7.3 AT5G51410 LUC7 N terminus domain-containing protein [detail] 835215
7.1 AT3G59470 Far-red impaired responsive (FAR1) family protein [detail] 825116
6.9 NF-YC11 nuclear factor Y, subunit C11 [detail] 820427
6.8 AT5G66010 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 836731
5.9 MBD8 methyl-CPG-binding domain 8 [detail] 838838
Coexpressed
gene list		 [Coexpressed gene list for ATSRL1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249611_at
249611_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249611_at
249611_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249611_at
249611_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833711      
Refseq ID (protein) NP_001154753.1 
NP_001190430.1 
NP_001318686.1 
NP_001330325.1 
NP_001330326.1 
NP_001330327.1 
NP_001330328.1 
NP_001330329.1 
NP_001330330.1 
NP_001330331.1 
NP_198553.2 
NP_851101.1 


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