ATTED-II : GeneID search result

[←][→] ath At5g37780 Gene

functional annotation

Function

calmodulin 1

GO BP

GO:0005513 [list] [network] detection of calcium ion	(7 genes)	ISS
GO:0009612 [list] [network] response to mechanical stimulus	(22 genes)	IEP

GO CC

GO:0005829 [list] [network] cytosol	(2559 genes)	RCA
GO:0009536 [list] [network] plastid	(5425 genes)	HDA
GO:0005634 [list] [network] nucleus	(10305 genes)	HDA ISM
GO:0005737 [list] [network] cytoplasm	(13880 genes)	ISM

GO MF

GO:0005509 [list] [network] calcium ion binding	(132 genes)	NAS
GO:0005515 [list] [network] protein binding	(5066 genes)	IPI

KEGG

ath04016 [list] [network] MAPK signaling pathway - plant (139 genes)

ath04070 [list] [network] Phosphatidylinositol signaling system (77 genes)

ath04626 [list] [network] Plant-pathogen interaction (204 genes)

Protein

NP_001154754.1 NP_001154755.1 NP_001330399.1 NP_198594.1

BLAST

NP_001154754.1 NP_001154755.1 NP_001330399.1 NP_198594.1

Orthologous

[Ortholog page] LOC543239 (tae) LOC543242 (tae) CaM6 (sly) CaM2 (sly) SCAM-2 (gma) SCAM-4 (gma) SCAM-3 (gma) SCAM-1 (gma) CAM5 (ath) CAM2 (ath) CML11 (ath) CAM7 (ath) CAM3 (ath) CAM8 (ath) CAM6 (ath) CAM4 (ath) LOC4324384 (osa) LOC4326903 (osa) LOC4332664 (osa) LOC4339172 (osa) LOC7454011 (ppo) LOC7455885 (ppo) LOC7489303 (ppo) LOC7495660 (ppo) LOC11414942 (mtr) LOC11431828 (mtr) LOC11436534 (mtr) LOC18094942 (ppo) LOC18105586 (ppo) LOC25480533 (mtr) LOC25482942 (mtr) LOC25484483 (mtr) LOC100270651 (tae) LOC100270652 (tae) LOC100500308 (gma) LOC100526987 (gma) LOC100527439 (gma) LOC100791702 (gma) LOC100793700 (gma) LOC100817351 (gma) LOC101243958 (sly) CaM5 (sly) CaM1 (sly) CaM3 (sly) LOC101257476 (sly) LOC102666811 (gma) LOC103829645 (bra) LOC103830067 (bra) LOC103831104 (bra) LOC103833461 (bra) LOC103841572 (bra) LOC103845600 (bra) LOC103848042 (bra) LOC103851405 (bra) LOC103856482 (bra) LOC103857966 (bra) LOC103863085 (bra) LOC103864746 (bra) LOC103868956 (bra) LOC103873625 (bra) LOC123060651 (tae) LOC123061064 (tae) LOC123069653 (tae) LOC123069711 (tae) LOC123079499 (tae) LOC123085715 (tae) LOC123097630 (tae) LOC123137677 (tae) LOC123182436 (tae) LOC123443486 (hvu) LOC123443542 (hvu) LOC123444155 (hvu) LOC123444658 (hvu) LOC123448781 (hvu)

Subcellular
localization
wolf

mito 3, nucl 2, cyto 2, cyto_nucl 2	(predict for NP_001154754.1)
nucl 3, cyto 2, cysk_nucl 2, chlo 1, extr 1, cysk 1, cyto_plas 1	(predict for NP_001154755.1)
chlo 7, nucl 2	(predict for NP_001330399.1)
nucl 4, mito 2, nucl_plas 2, cyto 1, extr 1, chlo_mito 1, mito_plas 1	(predict for NP_198594.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001154754.1)
other 8	(predict for NP_001154755.1)
mito 4	(predict for NP_001330399.1)
other 8	(predict for NP_198594.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	5
ath04070	Phosphatidylinositol signaling system	5
ath04626	Plant-pathogen interaction	5

Genes directly connected with CAM1 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
17.1	CAM4	calmodulin 4	[detail]	842959
7.7	GRF10	general regulatory factor 10	[detail]	838837
7.3	CAM7	calmodulin 7	[detail]	823492
6.8	UXS5	UDP-XYL synthase 5	[detail]	823794

Coexpressed
gene list

[Coexpressed gene list for CAM1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

249582_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

249582_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

249582_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	833756
Refseq ID (protein)	NP_001154754.1
	NP_001154755.1
	NP_001330399.1
	NP_198594.1

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