[←][→] ath   AT5G38120 Gene
functional annotation
Function   AMP-dependent synthetase and ligase family protein  
GO BP
GO CC
GO:0005777 [list] [network] peroxisome  (325 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0016207 [list] [network] 4-coumarate-CoA ligase activity  (13 genes)  ISS  
GO:0016874 [list] [network] ligase activity  (232 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath00592 [list] [network] alpha-Linolenic acid metabolism (44 genes)
Protein NP_001331962.1  NP_001331963.1  NP_001331964.1  NP_198628.2 
BLAST NP_001331962.1  NP_001331963.1  NP_001331964.1  NP_198628.2 
Orthologous [Ortholog page] AT1G20490 (ath)  AT1G20500 (ath)  OPCL1 (ath)  LOC4331515 (osa)  LOC11445262 (mtr)  LOC25482216 (mtr)  LOC100243654 (vvi)  LOC100265969 (vvi)  LOC100274307 (zma)  LOC100811344 (gma)  LOC101251665 (sly)  LOC103829425 (bra)  LOC103829426 (bra)  LOC103835791 (bra)  LOC103835792 (bra)  LOC103835794 (bra)  LOC103835795 (bra)  LOC103872841 (bra) 
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 1,  nucl 1,  cyto 1,  plas 1,  cyto_nucl 1,  nucl_plas 1,  cyto_plas 1  (predict for NP_001331962.1)
chlo 6,  chlo_mito 4,  mito 1,  nucl 1,  cyto 1,  plas 1,  cyto_nucl 1,  nucl_plas 1,  cyto_plas 1  (predict for NP_001331963.1)
chlo 6,  chlo_mito 4,  mito 1,  nucl 1,  cyto 1,  plas 1,  cyto_nucl 1,  nucl_plas 1,  cyto_plas 1  (predict for NP_001331964.1)
chlo 6,  chlo_mito 4,  nucl 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_198628.2)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001331962.1)
chlo 7  (predict for NP_001331963.1)
chlo 7  (predict for NP_001331964.1)
chlo 7  (predict for NP_198628.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 2
Genes directly connected with 4CL8 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.4 PGL5 6-phosphogluconolactonase 5 [detail] 832513
5.3 CSLA01 cellulose synthase-like A01 [detail] 827360
5.2 TPS10 terpene synthase 10 [detail] 816955
4.6 CSLG1 cellulose synthase like G1 [detail] 828501
Coexpressed
gene list		 [Coexpressed gene list for 4CL8]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249540_at
249540_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249540_at
249540_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249540_at
249540_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833792      
Refseq ID (protein) NP_001331962.1 
NP_001331963.1 
NP_001331964.1 
NP_198628.2 


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