[←][→] ath   At5g38470 Gene
functional annotation
Function   Rad23 UV excision repair protein family      
GO BP
GO:0006289 [list] [network] nucleotide-excision repair  (17 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (36 genes)  IEA  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP  
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0070628 [list] [network] proteasome binding  (6 genes)  IDA  
GO:0031593 [list] [network] polyubiquitin modification-dependent protein binding  (8 genes)  IDA  
GO:0043130 [list] [network] ubiquitin binding  (35 genes)  IDA  
KEGG ath03420 [list] [network] Nucleotide excision repair (62 genes)
ath04141 [list] [network] Protein processing in endoplasmic reticulum (215 genes)
Protein NP_001078680.1  NP_198663.1 
BLAST NP_001078680.1  NP_198663.1 
Orthologous [Ortholog page] RAD23C (ath)  LOC4340699 (osa)  LOC4345632 (osa)  LOC4347014 (osa)  LOC7477421 (ppo)  LOC7488352 (ppo)  LOC7489348 (ppo)  LOC18099502 (ppo)  LOC25485511 (mtr)  LOC25499820 (mtr)  LOC100809066 (gma)  LOC100814162 (gma)  LOC100817821 (gma)  LOC100818012 (gma)  RAD23d (sly)  LOC101249452 (sly)  LOC101258124 (sly)  LOC103850114 (bra)  LOC103858967 (bra)  LOC103863786 (bra)  LOC123103689 (tae)  LOC123111926 (tae)  LOC123121483 (tae)  LOC123149972 (tae)  LOC123156729 (tae)  LOC123164094 (tae)  LOC123396360 (hvu)  LOC123407404 (hvu) 
Subcellular
localization
wolf
cyto 4,  chlo 4,  mito 1  (predict for NP_001078680.1)
cyto 4,  chlo 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_198663.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001078680.1)
other 9  (predict for NP_198663.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 10
ath04141 Protein processing in endoplasmic reticulum 4
Genes directly connected with RAD23D on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.6 UFD1 ubiquitin fusion degradation 1 [detail] 816666
10.5 PBA1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein [detail] 829257
9.8 PBB1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein [detail] 822364
8.2 SKD1 AAA-type ATPase family protein [detail] 817306
7.9 SKP1 S phase kinase-associated protein 1 [detail] 843928
7.7 GRF5 general regulatory factor 5 [detail] 831462
7.2 AT3G53970 proteasome inhibitor-like protein [detail] 824564
6.8 AL2 alfin-like 2 [detail] 820290
6.5 PBS2 cysteine and histidine-rich domain-containing protein RAR1 [detail] 835244
6.4 AT1G14570 UBX domain-containing protein [detail] 838019
5.1 AT3G20800 Cell differentiation, Rcd1-like protein [detail] 821628
Coexpressed
gene list		 [Coexpressed gene list for RAD23D]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249512_at
249512_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249512_at
249512_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249512_at
249512_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833835      
Refseq ID (protein) NP_001078680.1 
NP_198663.1 


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