[←][→] ath   AT5G38480 Gene
functional annotation
Function   general regulatory factor 3  
GO BP
GO:0051365 [list] [network] cellular response to potassium ion starvation  (7 genes)  IEP  
GO:0050826 [list] [network] response to freezing  (28 genes)  IMP  
GO:0006995 [list] [network] cellular response to nitrogen starvation  (33 genes)  IEP  
GO:0009631 [list] [network] cold acclimation  (59 genes)  IMP  
GO:0016036 [list] [network] cellular response to phosphate starvation  (110 genes)  IEP  
GO:0009873 [list] [network] ethylene-activated signaling pathway  (191 genes)  IEA  
GO:0009409 [list] [network] response to cold  (411 genes)  IEP  
GO:0019222 [list] [network] regulation of metabolic process  (3112 genes)  IMP  
GO CC
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA ISM  
GO MF
GO:0045309 [list] [network] protein phosphorylated amino acid binding  (16 genes)  TAS  
GO:0019904 [list] [network] protein domain specific binding  (17 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001318697.1  NP_001332624.1  NP_568557.1 
BLAST NP_001318697.1  NP_001332624.1  NP_568557.1 
Orthologous [Ortholog page] LOC542194 (zma)  LOC542285 (zma)  LOC542291 (zma)  TFT6 (sly)  LOC543565 (sly)  tft4 (sly)  TFT3 (sly)  SGF14M (gma)  GF14A (gma)  GRF7 (ath)  GRF2 (ath)  LOC4329775 (osa)  LOC4333880 (osa)  LOC4336066 (osa)  LOC4345634 (osa)  LOC4345850 (osa)  LOC4350697 (osa)  LOC7461788 (ppo)  LOC7468888 (ppo)  LOC11424391 (mtr)  LOC11432749 (mtr)  LOC100257548 (vvi)  LOC100259987 (vvi)  LOC100264912 (vvi)  LOC100279512 (zma)  LOC100283215 (zma)  LOC100285226 (zma)  SGF14h (gma)  SGF14I (gma)  SGF14K (gma)  SGF14G (gma)  LOC101247195 (sly)  LOC101255667 (sly)  LOC103629503 (zma)  LOC103630574 (zma)  LOC103643291 (zma)  LOC103830528 (bra)  LOC103832312 (bra)  LOC103839993 (bra)  LOC103850115 (bra)  LOC103853122 (bra)  LOC103858966 (bra)  LOC103863788 (bra)  LOC103870902 (bra) 
Subcellular
localization
wolf
chlo 3,  plas 3,  nucl_plas 3,  cyto 2,  nucl 1  (predict for NP_001318697.1)
chlo 3,  plas 3,  nucl_plas 3,  cyto 2,  nucl 1  (predict for NP_001332624.1)
chlo 3,  plas 3,  nucl_plas 3,  cyto 2,  nucl 1  (predict for NP_568557.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001318697.1)
other 9  (predict for NP_001332624.1)
other 9  (predict for NP_568557.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
ath04016 MAPK signaling pathway - plant 2
ath04070 Phosphatidylinositol signaling system 2
ath04626 Plant-pathogen interaction 2
Genes directly connected with GRF3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 SAR1B secretion-associated RAS 1B [detail] 842086
7.3 AT4G08520 SNARE-like superfamily protein [detail] 826411
7.1 GRF10 general regulatory factor 10 [detail] 838837
Coexpressed
gene list		 [Coexpressed gene list for GRF3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249514_at
249514_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249514_at
249514_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249514_at
249514_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833836      
Refseq ID (protein) NP_001318697.1 
NP_001332624.1 
NP_568557.1 


The preparation time of this page was 0.3 [sec].