[←][→] ath   At5g38480 Gene
functional annotation
Function   general regulatory factor 3    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0051365 [list] [network] cellular response to potassium ion starvation  (8 genes)  IEP  
GO:0006995 [list] [network] cellular response to nitrogen starvation  (27 genes)  IEP  
GO:0050826 [list] [network] response to freezing  (27 genes)  IMP  
GO:0009631 [list] [network] cold acclimation  (59 genes)  IMP  
GO:0016036 [list] [network] cellular response to phosphate starvation  (111 genes)  IEP  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP  
GO:0019222 [list] [network] regulation of metabolic process  (3152 genes)  IMP  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  HDA  
GO:0000325 [list] [network] plant-type vacuole  (785 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA ISM  
GO MF
GO:0045309 [list] [network] protein phosphorylated amino acid binding  (14 genes)  TAS  
GO:0005524 [list] [network] ATP binding  (253 genes)  HDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001318697.1  NP_001332624.1  NP_568557.1 
BLAST NP_001318697.1  NP_001332624.1  NP_568557.1 
Orthologous [Ortholog page] LOC542785 (tae)  LOC542786 (tae)  LOC543463 (tae)  TFT6 (sly)  LOC543565 (sly)  tft4 (sly)  TFT3 (sly)  SGF14M (gma)  GF14A (gma)  GRF7 (ath)  GRF1 (ath)  GRF5 (ath)  GF14 PHI (ath)  GRF2 (ath)  LOC4329775 (osa)  LOC4333880 (osa)  LOC4336066 (osa)  LOC4345634 (osa)  LOC4345850 (osa)  LOC4350697 (osa)  LOC7461788 (ppo)  LOC7468888 (ppo)  LOC11424391 (mtr)  LOC11432749 (mtr)  LOC18097620 (ppo)  LOC18107391 (ppo)  LOC100037565 (tae)  SGF14h (gma)  SGF14I (gma)  SGF14K (gma)  SGF14G (gma)  LOC101247195 (sly)  LOC101255667 (sly)  LOC101290654 (tae)  LOC103829331 (bra)  LOC103830528 (bra)  LOC103832312 (bra)  LOC103835702 (bra)  LOC103839993 (bra)  LOC103850115 (bra)  LOC103853122 (bra)  LOC103858966 (bra)  LOC103863788 (bra)  LOC103868836 (bra)  LOC103870902 (bra)  LOC112326037 (ppo)  LOC123045680 (tae)  LOC123060025 (tae)  LOC123068509 (tae)  LOC123086014 (tae)  LOC123090846 (tae)  LOC123097291 (tae)  LOC123160118 (tae)  LOC123167873 (tae)  LOC123189447 (tae)  LOC123413622 (hvu)  LOC123426924 (hvu)  LOC123442615 (hvu)  LOC123447439 (hvu)  LOC123448590 (hvu) 
Subcellular
localization
wolf
chlo 3,  plas 3,  nucl_plas 3,  cyto 2,  nucl 1  (predict for NP_001318697.1)
chlo 3,  plas 3,  nucl_plas 3,  cyto 2,  nucl 1  (predict for NP_001332624.1)
chlo 3,  plas 3,  nucl_plas 3,  cyto 2,  nucl 1  (predict for NP_568557.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001318697.1)
other 9  (predict for NP_001332624.1)
other 9  (predict for NP_568557.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
Genes directly connected with GRF3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.5 ROC5 rotamase cyclophilin 5 [detail] 829639
7.1 ARF1A1C Ras-related small GTP-binding family protein [detail] 819330
7.0 AT4G08520 SNARE-like superfamily protein [detail] 826411
Coexpressed
gene list		 [Coexpressed gene list for GRF3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249514_at
249514_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249514_at
249514_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249514_at
249514_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833836      
Refseq ID (protein) NP_001318697.1 
NP_001332624.1 
NP_568557.1 


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