[←][→] ath   At5g38840 Gene
functional annotation
Function   SMAD/FHA domain-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_198700.2 
BLAST NP_198700.2 
Orthologous [Ortholog page] LOC4340752 (osa)  LOC11430739 (mtr)  LOC18097653 (ppo)  LOC100778453 (gma)  LOC100794168 (gma)  LOC101247975 (sly)  LOC103863806 (bra)  LOC123150129 (tae)  LOC123156666 (tae)  LOC123164007 (tae)  LOC123407563 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto 2,  vacu 2,  nucl_plas 2  (predict for NP_198700.2)
Subcellular
localization
TargetP
chlo 7,  other 5  (predict for NP_198700.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT5G38840 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.1 AT4G08310 DNA ligase [detail] 826385
8.7 AT1G80810 Tudor/PWWP/MBT superfamily protein [detail] 844420
8.2 PRP40A pre-mRNA-processing protein 40A [detail] 841057
Coexpressed
gene list		 [Coexpressed gene list for AT5G38840]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249538_at
249538_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249538_at
249538_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249538_at
249538_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833875      
Refseq ID (protein) NP_198700.2 


The preparation time of this page was 0.1 [sec].