[←][→] ath   At5g38910 Gene
functional annotation
Function   RmlC-like cupins superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0030145 [list] [network] manganese ion binding  (44 genes)  IEA  
KEGG
Protein NP_001332456.1  NP_198707.1 
BLAST NP_001332456.1  NP_198707.1 
Orthologous [Ortholog page] AT3G04200 (ath)  AT3G05950 (ath)  GLP9 (ath)  AT5G38930 (ath)  AT5G38940 (ath)  AT5G38960 (ath)  GLP6 (ath)  AT5G39110 (ath)  AT5G39120 (ath)  AT5G39130 (ath)  AT5G39150 (ath)  AT5G39160 (ath)  AT5G39180 (ath)  GER2 (ath)  LOC4329389 (osa)  LOC4329390 (osa)  LOC4329391 (osa)  LOC4337008 (osa)  LOC7453557 (ppo)  LOC7469831 (ppo)  LOC7469832 (ppo)  LOC7474642 (ppo)  LOC7474643 (ppo)  LOC7474644 (ppo)  LOC7480413 (ppo)  LOC7480420 (ppo)  LOC7487706 (ppo)  LOC7487730 (ppo)  LOC7489692 (ppo)  LOC7489693 (ppo)  LOC11412593 (mtr)  LOC11414422 (mtr)  LOC11414568 (mtr)  LOC11419235 (mtr)  LOC11422481 (mtr)  LOC11424092 (mtr)  LOC11424098 (mtr)  LOC11425078 (mtr)  LOC11425316 (mtr)  LOC11426661 (mtr)  LOC11433625 (mtr)  LOC11433956 (mtr)  LOC11439325 (mtr)  LOC18096031 (ppo)  LOC18103504 (ppo)  LOC18103515 (ppo)  LOC18103516 (ppo)  LOC18103521 (ppo)  LOC18104102 (ppo)  LOC18104137 (ppo)  LOC18108197 (ppo)  LOC18108199 (ppo)  LOC18108201 (ppo)  LOC18109093 (ppo)  LOC25486309 (mtr)  LOC25486310 (mtr)  LOC25486313 (mtr)  LOC100306389 (gma)  GER3 (gma)  GER12 (gma)  GER2 (gma)  GER13 (gma)  GER14 (gma)  LOC100780252 (gma)  LOC100780789 (gma)  LOC100782768 (gma)  LOC100783871 (gma)  LOC100786576 (gma)  GER4 (gma)  LOC100788721 (gma)  GER11 (gma)  LOC100797415 (gma)  GER6 (gma)  LOC100803440 (gma)  LOC100814242 (gma)  GER20 (gma)  LOC100818120 (gma)  LOC100820481 (gma)  LOC101253136 (sly)  LOC101253431 (sly)  LOC101253729 (sly)  LOC101253951 (sly)  LOC101254252 (sly)  LOC102660582 (gma)  LOC103833457 (bra)  LOC103838740 (bra)  LOC103850001 (bra)  LOC103850135 (bra)  LOC103850187 (bra)  LOC103854691 (bra)  LOC103863820 (bra)  LOC103864164 (bra)  LOC103864208 (bra)  LOC112323815 (ppo)  LOC112323840 (ppo)  LOC112323842 (ppo)  LOC112323843 (ppo)  LOC112323844 (ppo)  LOC112323845 (ppo)  LOC112323846 (ppo)  LOC112323882 (ppo)  LOC112325192 (ppo)  LOC112325612 (ppo)  LOC112326061 (ppo)  LOC123041641 (tae)  LOC123042086 (tae)  LOC123042088 (tae)  LOC123049608 (tae)  LOC123050039 (tae)  LOC123050041 (tae)  LOC123083951 (tae)  LOC123084060 (tae)  LOC123084166 (tae)  LOC123084272 (tae)  LOC123084380 (tae)  LOC123086668 (tae)  LOC123086675 (tae)  LOC123086683 (tae)  LOC123086694 (tae)  LOC123086699 (tae)  LOC123106717 (tae)  LOC123106728 (tae)  LOC123131534 (tae)  LOC123133292 (tae)  LOC123134569 (tae)  LOC123138385 (tae)  LOC123148826 (tae)  LOC123156679 (tae)  LOC123156680 (tae)  LOC123156691 (tae)  LOC123159756 (tae)  LOC123164370 (tae)  LOC123164376 (tae)  LOC123164385 (tae)  LOC123164391 (tae)  LOC123164394 (tae)  LOC123164401 (tae)  LOC123164409 (tae)  LOC123164694 (tae)  LOC123164830 (tae)  LOC123164831 (tae)  LOC123164837 (tae)  LOC123172090 (tae)  LOC123186091 (tae)  LOC123186092 (tae)  LOC123405541 (hvu)  LOC123405552 (hvu)  LOC123405572 (hvu)  LOC123412769 (hvu)  LOC123412890 (hvu)  LOC123430574 (hvu)  LOC123430805 (hvu)  LOC123430806 (hvu) 
Subcellular
localization
wolf
vacu 4,  chlo 3,  extr 1,  chlo_mito 1  (predict for NP_001332456.1)
plas 6,  vacu 1,  chlo 1,  E.R. 1,  golg 1  (predict for NP_198707.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001332456.1)
scret 9  (predict for NP_198707.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00999 Biosynthesis of various plant secondary metabolites; Including: Crocin biosynthesis, Cannabidiol biosynthesis, Mugineic acid biosynthesis, Pentagalloylglucose biosynthesis, Benzoxazinoid biosynthesis, Gramine biosynthesis, Coumarin biosynthesis, Furanocoumarin biosynthesis, Hordatine biosynthesis, Podophyllotoxin biosynthesis 2
ath00940 Phenylpropanoid biosynthesis 2
Genes directly connected with AT5G38910 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.0 AT1G26390 FAD-binding Berberine family protein [detail] 839181
7.7 AT1G26240 Proline-rich extensin-like family protein [detail] 839165
7.2 CYP82C2 cytochrome P450, family 82, subfamily C, polypeptide 2 [detail] 829327
6.9 AT4G04990 serine/arginine repetitive matrix-like protein (DUF761) [detail] 825841
6.9 GLP9 germin-like protein 9 [detail] 827113
5.2 AT2G30660 ATP-dependent caseinolytic (Clp) protease/crotonase family protein [detail] 817616
Coexpressed
gene list		 [Coexpressed gene list for AT5G38910]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249476_at
249476_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249476_at
249476_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249476_at
249476_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833883      
Refseq ID (protein) NP_001332456.1 
NP_198707.1 


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