ATTED-II : GeneID search result

[←][→] ath AT5G38910 Gene

functional annotation

Function

RmlC-like cupins superfamily protein

GO BP

GO CC

GO:0048046 [list] [network] apoplast	(443 genes)	IEA
GO:0005618 [list] [network] cell wall	(685 genes)	IBA
GO:0005576 [list] [network] extracellular region	(3363 genes)	ISM

GO MF

GO:0030145 [list] [network] manganese ion binding	(47 genes)	IEA
GO:0045735 [list] [network] nutrient reservoir activity	(55 genes)	IEA

KEGG

Protein

NP_001332456.1 NP_198707.1

BLAST

NP_001332456.1 NP_198707.1

Orthologous

[Ortholog page] AT3G04200 (ath) AT3G05950 (ath) GLP9 (ath) AT5G38930 (ath) AT5G38940 (ath) AT5G38960 (ath) GLP6 (ath) AT5G39110 (ath) AT5G39120 (ath) AT5G39130 (ath) AT5G39150 (ath) AT5G39160 (ath) AT5G39180 (ath) GER2 (ath) LOC4329389 (osa) LOC4329390 (osa) LOC4329391 (osa) LOC4337008 (osa) LOC4344837 (osa) LOC4344838 (osa) LOC4344841 (osa) LOC4344843 (osa) LOC4344844 (osa) LOC4344846 (osa) LOC4344999 (osa) LOC4351537 (osa) LOC4351538 (osa) LOC4351539 (osa) LOC7480416 (ppo) LOC7487706 (ppo) LOC9272376 (osa) LOC11412593 (mtr) LOC11414422 (mtr) LOC11414568 (mtr) LOC11419235 (mtr) LOC11422481 (mtr) LOC11424098 (mtr) LOC11425078 (mtr) LOC11425316 (mtr) LOC11426661 (mtr) LOC11429372 (mtr) LOC11433625 (mtr) LOC11433956 (mtr) LOC11434895 (mtr) LOC11439325 (mtr) LOC25486309 (mtr) LOC25486310 (mtr) LOC25486313 (mtr) LOC100232941 (vvi) GER1 (vvi) GER4 (vvi) GER7 (vvi) GER5 (vvi) LOC100240807 (vvi) LOC100240839 (vvi) LOC100242546 (vvi) LOC100242782 (vvi) LOC100243126 (vvi) LOC100243864 (vvi) LOC100243981 (vvi) LOC100244270 (vvi) LOC100244552 (vvi) LOC100245589 (vvi) LOC100247597 (vvi) LOC100247931 (vvi) LOC100249403 (vvi) LOC100249435 (vvi) LOC100251041 (vvi) LOC100251187 (vvi) LOC100252737 (vvi) LOC100252783 (vvi) LOC100254415 (vvi) LOC100254460 (vvi) LOC100254770 (vvi) LOC100256198 (vvi) LOC100256308 (vvi) LOC100258077 (vvi) LOC100258094 (vvi) LOC100259518 (vvi) LOC100260968 (vvi) LOC100261293 (vvi) LOC100261880 (vvi) LOC100264708 (vvi) LOC100264862 (vvi) LOC100265074 (vvi) LOC100266609 (vvi) LOC100273345 (zma) LOC100286113 (zma) LOC100306389 (gma) GER3 (gma) GER12 (gma) GER2 (gma) GER13 (gma) GER14 (gma) LOC100780252 (gma) LOC100780789 (gma) LOC100782768 (gma) LOC100783871 (gma) LOC100786576 (gma) GER4 (gma) LOC100788721 (gma) GER11 (gma) LOC100797415 (gma) GER6 (gma) LOC100803440 (gma) LOC100814242 (gma) GER20 (gma) LOC100818120 (gma) LOC100820481 (gma) LOC100853010 (vvi) LOC100853695 (vvi) LOC100853730 (vvi) LOC101249492 (sly) LOC101253136 (sly) LOC101253431 (sly) LOC101253729 (sly) LOC101253951 (sly) LOC101254252 (sly) LOC102660582 (gma) LOC103626662 (zma) LOC103641112 (zma) LOC103641113 (zma) LOC103641117 (zma) LOC103641119 (zma) LOC103641518 (zma) LOC103653008 (zma) LOC103653009 (zma) LOC103653010 (zma) LOC103653011 (zma) LOC103653012 (zma) LOC103653013 (zma) LOC103653014 (zma) LOC103653015 (zma) LOC103653016 (zma) LOC103653018 (zma) LOC103653019 (zma) LOC103653021 (zma) LOC103653022 (zma) LOC103653023 (zma) LOC103653024 (zma) LOC103653025 (zma) LOC103654664 (zma) LOC103833457 (bra) LOC103838740 (bra) LOC103850001 (bra) LOC103850135 (bra) LOC103850187 (bra) LOC103854691 (bra) LOC103863820 (bra) LOC103864164 (bra) LOC103864208 (bra) LOC104882055 (vvi) LOC109121459 (vvi) LOC109121478 (vvi) LOC109121479 (vvi) LOC109121491 (vvi) LOC109123824 (vvi) LOC109123856 (vvi) LOC109123878 (vvi) LOC109123887 (vvi) LOC109123892 (vvi) LOC109123900 (vvi) LOC109123939 (vvi) LOC109945489 (zma) LOC112935981 (osa) LOC112935992 (osa) LOC112936027 (osa)

Subcellular
localization
wolf

vacu 4, chlo 3, extr 1, chlo_mito 1	(predict for NP_001332456.1)
plas 6, vacu 1, chlo 1, E.R. 1, golg 1	(predict for NP_198707.1)

Subcellular
localization
TargetP

scret 9	(predict for NP_001332456.1)
scret 9	(predict for NP_198707.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G38910 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.0	GLP4	germin-like protein 4	[detail]	838478
6.5	AT4G04990	serine/arginine repetitive matrix-like protein (DUF761)	[detail]	825841
6.4	AT1G26390	FAD-binding Berberine family protein	[detail]	839181
5.6	AT2G30660	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[detail]	817616

Coexpressed
gene list

[Coexpressed gene list for AT5G38910]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

249476_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

249476_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

249476_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	833883
Refseq ID (protein)	NP_001332456.1
Refseq ID (protein)	NP_198707.1

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