[←][→] ath   AT5G39040 Gene
functional annotation
Function   transporter associated with antigen processing protein 2  
GO BP
GO:0010044 [list] [network] response to aluminum ion  (14 genes)  IMP  
GO:0055085 [list] [network] transmembrane transport  (778 genes)  IEA  
GO CC
GO:0000325 [list] [network] plant-type vacuole  (169 genes)  IDA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IBA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO MF
GO:0042626 [list] [network] ATPase-coupled transmembrane transporter activity  (186 genes)  IBA ISS  
GO:0016887 [list] [network] ATPase activity  (507 genes)  IEA  
GO:0022857 [list] [network] transmembrane transporter activity  (1151 genes)  ISS  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG
Protein NP_001332027.1  NP_198720.2 
BLAST NP_001332027.1  NP_198720.2 
Orthologous [Ortholog page] LOC4334150 (osa)  LOC7484581 (ppo)  LOC25493901 (mtr)  LOC100248338 (vvi)  LOC100254861 (vvi)  LOC100259965 (vvi)  LOC100285409 (zma)  LOC100810510 (gma)  LOC100818615 (gma)  ABCB21 (sly)  LOC103863817 (bra) 
Subcellular
localization
wolf
plas 3,  vacu 2,  E.R. 2,  golg 2,  E.R._vacu 2,  cyto_plas 2  (predict for NP_001332027.1)
E.R. 3,  plas 2,  golg 2,  E.R._vacu 2,  cyto_plas 1  (predict for NP_198720.2)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_001332027.1)
other 7,  mito 3  (predict for NP_198720.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath04016 MAPK signaling pathway - plant 2
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with ABCB27 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 PA200 proteasome activating protein 200 [detail] 820533
5.6 AT3G28480 Oxoglutarate/iron-dependent oxygenase [detail] 822478
5.3 AT4G17830 Peptidase M20/M25/M40 family protein [detail] 827506
Coexpressed
gene list		 [Coexpressed gene list for ABCB27]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249487_at
249487_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249487_at
249487_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249487_at
249487_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833896      
Refseq ID (protein) NP_001332027.1 
NP_198720.2 


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