ATTED-II : GeneID search result

[←][→] ath AT5G39130 Gene

functional annotation

Function

RmlC-like cupins superfamily protein

GO BP

GO CC

GO:0048046 [list] [network] apoplast	(443 genes)	IEA
GO:0005618 [list] [network] cell wall	(685 genes)	IBA
GO:0005576 [list] [network] extracellular region	(3363 genes)	ISM

GO MF

GO:0030145 [list] [network] manganese ion binding	(47 genes)	IEA
GO:0045735 [list] [network] nutrient reservoir activity	(55 genes)	IEA

KEGG

Protein

NP_198729.1

BLAST

NP_198729.1

Orthologous

[Ortholog page] AT3G04200 (ath) AT3G05950 (ath) GLP9 (ath) AT5G38910 (ath) AT5G38930 (ath) AT5G38940 (ath) AT5G38960 (ath) GLP6 (ath) AT5G39110 (ath) AT5G39120 (ath) AT5G39150 (ath) AT5G39160 (ath) AT5G39180 (ath) GER2 (ath) LOC4329389 (osa) LOC4329390 (osa) LOC4329391 (osa) LOC4337008 (osa) LOC4344837 (osa) LOC4344838 (osa) LOC4344841 (osa) LOC4344843 (osa) LOC4344844 (osa) LOC4344846 (osa) LOC4344999 (osa) LOC4351537 (osa) LOC4351538 (osa) LOC4351539 (osa) LOC7480416 (ppo) LOC7487706 (ppo) LOC9272376 (osa) LOC11412593 (mtr) LOC11414422 (mtr) LOC11414568 (mtr) LOC11419235 (mtr) LOC11422481 (mtr) LOC11424098 (mtr) LOC11425078 (mtr) LOC11425316 (mtr) LOC11426661 (mtr) LOC11429372 (mtr) LOC11433625 (mtr) LOC11433956 (mtr) LOC11434895 (mtr) LOC11439325 (mtr) LOC25486309 (mtr) LOC25486310 (mtr) LOC25486313 (mtr) LOC100232941 (vvi) GER1 (vvi) GER4 (vvi) GER7 (vvi) GER5 (vvi) LOC100240807 (vvi) LOC100240839 (vvi) LOC100242546 (vvi) LOC100242782 (vvi) LOC100243126 (vvi) LOC100243864 (vvi) LOC100243981 (vvi) LOC100244270 (vvi) LOC100244552 (vvi) LOC100245589 (vvi) LOC100247597 (vvi) LOC100247931 (vvi) LOC100249403 (vvi) LOC100249435 (vvi) LOC100251041 (vvi) LOC100251187 (vvi) LOC100252737 (vvi) LOC100252783 (vvi) LOC100254415 (vvi) LOC100254460 (vvi) LOC100254770 (vvi) LOC100256198 (vvi) LOC100256308 (vvi) LOC100258077 (vvi) LOC100258094 (vvi) LOC100259518 (vvi) LOC100260968 (vvi) LOC100261293 (vvi) LOC100261880 (vvi) LOC100264708 (vvi) LOC100264862 (vvi) LOC100265074 (vvi) LOC100266609 (vvi) LOC100273345 (zma) LOC100286113 (zma) LOC100306389 (gma) GER3 (gma) GER12 (gma) GER2 (gma) GER13 (gma) GER14 (gma) LOC100780252 (gma) LOC100780789 (gma) LOC100782768 (gma) LOC100783871 (gma) LOC100786576 (gma) GER4 (gma) LOC100788721 (gma) GER11 (gma) LOC100797415 (gma) GER6 (gma) LOC100803440 (gma) LOC100814242 (gma) GER20 (gma) LOC100818120 (gma) LOC100820481 (gma) LOC100853010 (vvi) LOC100853695 (vvi) LOC100853730 (vvi) LOC101249492 (sly) LOC101253136 (sly) LOC101253431 (sly) LOC101253729 (sly) LOC101253951 (sly) LOC101254252 (sly) LOC102660582 (gma) LOC103626662 (zma) LOC103641112 (zma) LOC103641113 (zma) LOC103641117 (zma) LOC103641119 (zma) LOC103641518 (zma) LOC103653008 (zma) LOC103653009 (zma) LOC103653010 (zma) LOC103653011 (zma) LOC103653012 (zma) LOC103653013 (zma) LOC103653014 (zma) LOC103653015 (zma) LOC103653016 (zma) LOC103653018 (zma) LOC103653019 (zma) LOC103653021 (zma) LOC103653022 (zma) LOC103653023 (zma) LOC103653024 (zma) LOC103653025 (zma) LOC103654664 (zma) LOC103833457 (bra) LOC103838740 (bra) LOC103850001 (bra) LOC103850135 (bra) LOC103850187 (bra) LOC103854691 (bra) LOC103863820 (bra) LOC103864164 (bra) LOC103864208 (bra) LOC104882055 (vvi) LOC109121459 (vvi) LOC109121478 (vvi) LOC109121479 (vvi) LOC109121491 (vvi) LOC109123824 (vvi) LOC109123856 (vvi) LOC109123878 (vvi) LOC109123887 (vvi) LOC109123892 (vvi) LOC109123900 (vvi) LOC109123939 (vvi) LOC109945489 (zma) LOC112935981 (osa) LOC112935992 (osa) LOC112936027 (osa)

Subcellular
localization
wolf

extr 3, chlo 2, cyto 1, mito 1, E.R. 1, cyto_E.R. 1

(predict for NP_198729.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_198729.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	4

Genes directly connected with AT5G39130 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
11.2	AT5G39120	RmlC-like cupins superfamily protein	[detail]	833905
5.9	AT3G19780	hypothetical protein	[detail]	821515
5.2	MES6	methyl esterase 6	[detail]	816887

Coexpressed
gene list

[Coexpressed gene list for AT5G39130]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

249491_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

249491_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

249491_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	833906
Refseq ID (protein)	NP_198729.1

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