ATTED-II : GeneID search result

[←][→] ath At5g39710 Gene

functional annotation

Function

Tetratricopeptide repeat (TPR)-like superfamily protein

Plant GARDEN Plant GARDEN JBrowse

GO BP

GO:0009793 [list] [network] embryo development ending in seed dormancy

(697 genes)

NAS

GO CC

GO:0005739 [list] [network] mitochondrion	(4228 genes)	HDA
GO:0009507 [list] [network] chloroplast	(5004 genes)	ISM

GO MF

KEGG

Protein

NP_198787.1

BLAST

NP_198787.1

Orthologous

[Ortholog page] LOC4340159 (osa) LOC7490013 (ppo) LOC25482653 (mtr) LOC100808787 (gma) LOC101261764 (sly) LOC103863910 (bra) LOC123150940 (tae) LOC123157929 (tae) LOC123167312 (tae) LOC123408152 (hvu)

Subcellular
localization
wolf

mito 6, cyto_mito 4, chlo 2

(predict for NP_198787.1)

Subcellular
localization
TargetP

mito 5

(predict for NP_198787.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with EMB2745 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
7.2	AT5G39840	ATP-dependent RNA helicase	[detail]	833980
7.2	AT2G01740	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	814704
6.8	EMB2217	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	844287
6.3	AT1G09820	Pentatricopeptide repeat (PPR-like) superfamily protein	[detail]	837514
5.7	ULP1A	UB-like protease 1A	[detail]	819876
4.1	AT4G23770	uncharacterized protein	[detail]	828477

Coexpressed
gene list

[Coexpressed gene list for EMB2745]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

249464_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

249464_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

249464_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	833967
Refseq ID (protein)	NP_198787.1

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