[←][→] ath   At5g39830 Gene
functional annotation
Function   Trypsin family protein with PDZ domain-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010206 [list] [network] photosystem II repair  (13 genes)  IMP  
GO:0006508 [list] [network] proteolysis  (413 genes)  IEA  
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (50 genes)  HDA IDA  
GO:0031977 [list] [network] thylakoid lumen  (67 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0004252 [list] [network] serine-type endopeptidase activity  (70 genes)  IEA  
GO:0008233 [list] [network] peptidase activity  (312 genes)  IDA  
KEGG
Protein NP_568575.1  NP_974863.1 
BLAST NP_568575.1  NP_974863.1 
Orthologous [Ortholog page] LOC7494582 (ppo)  LOC9268615 (osa)  LOC25495301 (mtr)  LOC100804040 (gma)  LOC101267480 (sly)  LOC103849895 (bra)  LOC123045662 (tae)  LOC123053537 (tae)  LOC123189431 (tae)  LOC123426909 (hvu) 
Subcellular
localization
wolf
cyto 9,  chlo 1  (predict for NP_568575.1)
cyto 9,  chlo 1,  cysk 1  (predict for NP_974863.1)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for NP_568575.1)
chlo 7,  other 4  (predict for NP_974863.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with DEG8 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.3 AT2G42130 Plastid-lipid associated protein PAP / fibrillin family protein [detail] 818813
8.0 AT5G27560 DUF1995 domain protein, putative (DUF1995) [detail] 832816
7.8 AT3G15110 uncharacterized protein [detail] 820741
6.9 HDA14 histone deacetylase 14 [detail] 829484
6.7 CRTISO carotenoid isomerase [detail] 837193
6.4 LDA limit dextrinase [detail] 830315
Coexpressed
gene list		 [Coexpressed gene list for DEG8]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249421_at
249421_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249421_at
249421_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249421_at
249421_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833979      
Refseq ID (protein) NP_568575.1 
NP_974863.1 


The preparation time of this page was 0.1 [sec].