[←][→] ath   AT5G39850 Gene
functional annotation
Function   Ribosomal protein S4  
GO BP
GO:0045903 [list] [network] positive regulation of translational fidelity  (3 genes)  IBA  
GO:0006412 [list] [network] translation  (1149 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (110 genes)  IBA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  RCA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO MF
GO:0019843 [list] [network] rRNA binding  (99 genes)  IBA  
GO:0003735 [list] [network] structural constituent of ribosome  (248 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03010 [list] [network] Ribosome (356 genes)
Protein NP_198801.1 
BLAST NP_198801.1 
Orthologous [Ortholog page] AT5G15200 (ath)  LOC4331662 (osa)  LOC4350869 (osa)  LOC7467928 (ppo)  LOC7471882 (ppo)  LOC9268088 (osa)  LOC11405349 (mtr)  LOC11416568 (mtr)  LOC11419392 (mtr)  LOC11428102 (mtr)  LOC25484126 (mtr)  LOC100192774 (zma)  LOC100260300 (vvi)  LOC100264515 (vvi)  LOC100267189 (vvi)  LOC100282862 (zma)  LOC100283332 (zma)  LOC100305663 (gma)  LOC100790098 (gma)  LOC100807649 (gma)  LOC100810569 (gma)  LOC101253011 (sly)  LOC101253922 (sly)  LOC101257063 (sly)  LOC101261708 (sly)  LOC103846432 (bra)  LOC103849898 (bra)  LOC103850975 (bra)  LOC103856122 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 4,  mito 1  (predict for NP_198801.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for NP_198801.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath03008 Ribosome biogenesis in eukaryotes 3
Genes directly connected with AT5G39850 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 NUC-L2 nucleolin like 2 [detail] 821392
5.8 AT5G05990 Mitochondrial glycoprotein family protein [detail] 830486
5.8 AT1G15250 Zinc-binding ribosomal protein family protein [detail] 838092
5.4 AT3G58200 TRAF-like family protein [detail] 824989
5.4 AT3G58930 F-box/RNI-like superfamily protein [detail] 825062
5.1 AT3G16650 Transducin/WD40 repeat-like superfamily protein [detail] 820917
4.2 ARI15 RING/U-box superfamily protein [detail] 836496
Coexpressed
gene list		 [Coexpressed gene list for AT5G39850]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249427_at
249427_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249427_at
249427_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249427_at
249427_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833981      
Refseq ID (protein) NP_198801.1 


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