[←][→] ath   AT5G39860 Gene
functional annotation
Function   basic helix-loop-helix (bHLH) DNA-binding family protein  
GO BP
GO:0048510 [list] [network] regulation of timing of transition from vegetative to reproductive phase  (36 genes)  IMP  
GO:0009640 [list] [network] photomorphogenesis  (71 genes)  IMP  
GO:0009740 [list] [network] gibberellic acid mediated signaling pathway  (71 genes)  IEA  
GO:0009742 [list] [network] brassinosteroid mediated signaling pathway  (82 genes)  IEA  
GO:0009741 [list] [network] response to brassinosteroid  (109 genes)  IEP  
GO:0009826 [list] [network] unidimensional cell growth  (279 genes)  IMP  
GO:0040008 [list] [network] regulation of growth  (315 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (570 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_198802.1 
BLAST NP_198802.1 
Orthologous [Ortholog page] BNQ2 (ath)  KDR (ath)  BS1 (ath)  PRE5 (ath)  LOC4330725 (osa)  LOC4331778 (osa)  LOC4340551 (osa)  LOC7472556 (ppo)  LOC7482464 (ppo)  LOC7483439 (ppo)  LOC11414165 (mtr)  LOC11419079 (mtr)  LOC25490501 (mtr)  LOC25495294 (mtr)  LOC100248549 (vvi)  LOC100252480 (vvi)  LOC100256731 (vvi)  LOC100281850 (zma)  LOC100283388 (zma)  LOC100284841 (zma)  LOC100286033 (zma)  LOC100286150 (zma)  Style2.1 (sly)  LOC100305611 (gma)  LOC100527636 (gma)  LOC100784537 (gma)  LOC100787967 (gma)  LOC100791371 (gma)  LOC100794486 (gma)  LOC100796852 (gma)  LOC100800940 (gma)  LOC100804830 (gma)  LOC100816720 (gma)  LOC101246621 (sly)  LOC101252193 (sly)  LOC101261116 (sly)  PRE2 (sly)  LOC103631776 (zma)  LOC103829210 (bra)  LOC103830696 (bra)  LOC103831924 (bra)  LOC103835623 (bra)  LOC103837033 (bra)  LOC103840665 (bra)  LOC103846435 (bra)  LOC103850156 (bra)  LOC103850972 (bra)  LOC103852908 (bra)  LOC103854180 (bra)  LOC103856118 (bra)  LOC103875126 (bra)  LOC107277392 (osa)  LOC107278079 (osa)  LOC112417120 (mtr) 
Subcellular
localization
wolf
mito 5,  chlo 4,  cyto_nucl 1,  golg_plas 1  (predict for NP_198802.1)
Subcellular
localization
TargetP
chlo 6,  mito 4  (predict for NP_198802.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 10
Genes directly connected with PRE1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.2 AT1G29460 SAUR-like auxin-responsive protein family [detail] 839822
9.8 SAUR23 SAUR-like auxin-responsive protein family [detail] 831310
9.6 SAUR15 SAUR-like auxin-responsive protein family [detail] 830040
4.5 AT5G64780 holocarboxylase synthetase [detail] 836599
Coexpressed
gene list		 [Coexpressed gene list for PRE1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249383_at
249383_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249383_at
249383_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249383_at
249383_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833982      
Refseq ID (protein) NP_198802.1 


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