[←][→] ath   At5g39860 Gene
functional annotation
Function   basic helix-loop-helix (bHLH) DNA-binding family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048510 [list] [network] regulation of timing of transition from vegetative to reproductive phase  (43 genes)  IMP  
GO:0009640 [list] [network] photomorphogenesis  (80 genes)  IMP  
GO:0009741 [list] [network] response to brassinosteroid  (99 genes)  IEP  
GO:0040008 [list] [network] regulation of growth  (345 genes)  IEA  
GO:0009826 [list] [network] unidimensional cell growth  (356 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (421 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_198802.1 
BLAST NP_198802.1 
Orthologous [Ortholog page] BNQ3 (ath)  BNQ2 (ath)  KDR (ath)  BS1 (ath)  PRE5 (ath)  LOC7472556 (ppo)  LOC7482464 (ppo)  LOC7483439 (ppo)  LOC11414165 (mtr)  LOC11419079 (mtr)  LOC18105801 (ppo)  LOC25490501 (mtr)  LOC25495294 (mtr)  Style2.1 (sly)  LOC100305611 (gma)  LOC100527636 (gma)  LOC100784537 (gma)  LOC100787967 (gma)  LOC100791371 (gma)  LOC100794486 (gma)  LOC100796852 (gma)  LOC100800940 (gma)  LOC100804830 (gma)  LOC100816720 (gma)  LOC101246621 (sly)  LOC101252193 (sly)  LOC101261116 (sly)  PRE2 (sly)  LOC103829210 (bra)  LOC103830696 (bra)  LOC103831924 (bra)  LOC103835623 (bra)  LOC103837033 (bra)  LOC103840665 (bra)  LOC103846435 (bra)  LOC103850156 (bra)  LOC103850972 (bra)  LOC103852908 (bra)  LOC103854180 (bra)  LOC103856118 (bra)  LOC103873210 (bra)  LOC103875126 (bra)  LOC107277392 (osa)  LOC112417120 (mtr)  LOC123084765 (tae)  LOC123100303 (tae)  LOC123449567 (hvu) 
Subcellular
localization
wolf
mito 5,  chlo 4,  cyto_nucl 1,  golg_plas 1  (predict for NP_198802.1)
Subcellular
localization
TargetP
chlo 6,  mito 4  (predict for NP_198802.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 11
Genes directly connected with PRE1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.7 SAUR23 SAUR-like auxin-responsive protein family [detail] 831310
11.1 AT1G29460 SAUR-like auxin-responsive protein family [detail] 839822
9.4 SAUR15 SAUR-like auxin-responsive protein family [detail] 830040
4.7 AT5G64780 holocarboxylase synthetase [detail] 836599
Coexpressed
gene list		 [Coexpressed gene list for PRE1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249383_at
249383_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249383_at
249383_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249383_at
249383_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 833982      
Refseq ID (protein) NP_198802.1 


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