[←][→] ath   At5g40340 Gene
functional annotation
Function   Tudor/PWWP/MBT superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0098532 [list] [network] histone H3-K27 trimethylation  (8 genes)  IGI IMP  
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (94 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IMP  
GO CC
GO:0035098 [list] [network] ESC/E(Z) complex  (9 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001331897.1  NP_198850.1 
BLAST NP_001331897.1  NP_198850.1 
Orthologous [Ortholog page] AT3G27860 (ath)  LOC7462996 (ppo)  LOC11425319 (mtr)  LOC25495151 (mtr)  LOC101252451 (sly)  LOC102666447 (gma)  LOC102666492 (gma)  LOC102667448 (gma)  LOC102668257 (gma)  LOC103850169 (bra)  LOC103875185 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001331897.1)
nucl 10  (predict for NP_198850.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001331897.1)
other 8  (predict for NP_198850.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT5G40340 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.3 AT2G44200 pre-mRNA splicing factor domain-containing protein [detail] 819028
9.0 LINC3 little nuclei3 [detail] 843210
8.6 AT5G53800 nucleic acid-binding protein [detail] 835461
8.4 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family protein [detail] 844015
7.3 CIP1 COP1-interactive protein 1 [detail] 834184
5.2 AT5G53220 uncharacterized protein [detail] 835403
Coexpressed
gene list		 [Coexpressed gene list for AT5G40340]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249409_at
249409_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249409_at
249409_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249409_at
249409_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834032      
Refseq ID (protein) NP_001331897.1 
NP_198850.1 


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