[←][→] ath   AT5G40340 Gene
functional annotation
Function   Tudor/PWWP/MBT superfamily protein  
GO BP
GO:0098532 [list] [network] histone H3-K27 trimethylation  (3 genes)  IGI  
GO CC
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001331897.1  NP_198850.1 
BLAST NP_001331897.1  NP_198850.1 
Orthologous [Ortholog page] AT3G27860 (ath)  LOC11425319 (mtr)  LOC25495151 (mtr)  LOC100267992 (vvi)  LOC101252451 (sly)  LOC102666447 (gma)  LOC102666492 (gma)  LOC102667448 (gma)  LOC102668257 (gma)  LOC103850169 (bra)  LOC103875186 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001331897.1)
nucl 10  (predict for NP_198850.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001331897.1)
other 8  (predict for NP_198850.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G40340 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.0 AT5G41020 myb family transcription factor [detail] 834104
9.1 AT5G53800 nucleic acid-binding protein [detail] 835461
9.1 LINC3 little nuclei3 [detail] 843210
9.0 AT2G44200 pre-mRNA splicing factor domain-containing protein [detail] 819028
8.6 AT1G76810 eukaryotic translation initiation factor 2 (eIF-2) family protein [detail] 844015
8.1 LINC1 little nuclei1 [detail] 843043
5.6 AT5G04020 calmodulin binding protein [detail] 830281
5.4 AT1G49520 SWIB complex BAF60b domain-containing protein [detail] 841376
5.3 AT3G57930 rho GTPase-activating gacO-like protein [detail] 824962
5.0 AT4G14350 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [detail] 827078
4.7 AT5G53220 hypothetical protein [detail] 835403
Coexpressed
gene list		 [Coexpressed gene list for AT5G40340]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249409_at
249409_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249409_at
249409_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249409_at
249409_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834032      
Refseq ID (protein) NP_001331897.1 
NP_198850.1 


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