[←][→] ath   AT5G40850 Gene
functional annotation
Function   urophorphyrin methylase 1  
GO BP
GO:0019354 [list] [network] siroheme biosynthetic process  (2 genes)  IDA  
GO:0032259 [list] [network] methylation  (371 genes)  IEA  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0004851 [list] [network] uroporphyrin-III C-methyltransferase activity  (1 genes)  IDA  
KEGG ath00860 [list] [network] Porphyrin and chlorophyll metabolism (53 genes)
Protein NP_001190444.1  NP_001331463.1  NP_198901.1 
BLAST NP_001190444.1  NP_001331463.1  NP_198901.1 
Orthologous [Ortholog page] LOC542745 (zma)  LOC4326671 (osa)  LOC11424663 (mtr)  LOC25497997 (mtr)  LOC100217089 (zma)  LOC100781598 (gma)  LOC100810127 (gma)  LOC100852901 (vvi)  LOC101261158 (sly)  LOC103864030 (bra) 
Subcellular
localization
wolf
mito 4,  chlo 4,  cyto_mito 3  (predict for NP_001190444.1)
mito 4,  chlo_mito 4,  cyto_mito 2,  chlo 2,  plas 1  (predict for NP_001331463.1)
mito 4,  chlo 4,  cyto_mito 3  (predict for NP_198901.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001190444.1)
chlo 7  (predict for NP_001331463.1)
chlo 7  (predict for NP_198901.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00030 Pentose phosphate pathway 4
ath00480 Glutathione metabolism 4
ath00910 Nitrogen metabolism 4
ath00195 Photosynthesis 3
Genes directly connected with UPM1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
17.9 NIR1 nitrite reductase 1 [detail] 816055
13.3 G6PD3 glucose-6-phosphate dehydrogenase 3 [detail] 839044
10.2 AT5G41670 6-phosphogluconate dehydrogenase family protein [detail] 834169
9.0 AT1G68238 transmembrane protein [detail] 6241144
8.4 AT5G62720 Integral membrane HPP family protein [detail] 836393
8.2 RFNR1 root FNR 1 [detail] 825887
6.5 GLT1 NADH-dependent glutamate synthase 1 [detail] 835427
6.3 TGA4 TGACG motif-binding factor 4 [detail] 830866
5.9 PMEAMT S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 841281
5.6 AT4G09620 Mitochondrial transcription termination factor family protein [detail] 826547
4.2 AT2G22200 Integrase-type DNA-binding superfamily protein [detail] 816754
Coexpressed
gene list		 [Coexpressed gene list for UPM1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249325_at
249325_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249325_at
249325_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249325_at
249325_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834085      
Refseq ID (protein) NP_001190444.1 
NP_001331463.1 
NP_198901.1 


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