[←][→] ath   At5g41560 Gene
functional annotation
Function   DET1 complexing ubiquitin ligase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (2 genes)  IMP  
GO:0009788 [list] [network] negative regulation of abscisic acid-activated signaling pathway  (60 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IPI ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001330332.1  NP_198971.1 
BLAST NP_001330332.1  NP_198971.1 
Orthologous [Ortholog page] LOC4331465 (osa)  LOC7472743 (ppo)  LOC11415365 (mtr)  LOC100527830 (gma)  LOC100784555 (gma)  LOC101255014 (sly)  LOC103864090 (bra)  LOC123093538 (tae)  LOC123098810 (tae)  LOC123105777 (tae)  LOC123449822 (hvu) 
Subcellular
localization
wolf
nucl 3,  chlo 3,  mito 3,  chlo_mito 3  (predict for NP_001330332.1)
nucl 9  (predict for NP_198971.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001330332.1)
chlo 8,  other 3  (predict for NP_198971.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 3
ath04145 Phagosome 2
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with AT5G41560 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.0 AT5G55290 ATPase, V0 complex, subunit E [detail] 835622
6.4 UBC36 ubiquitin-conjugating enzyme 36 [detail] 838260
6.2 AT4G10140 uncharacterized protein [detail] 826605
6.0 AT1G65000 F-box only protein [detail] 842808
Coexpressed
gene list		 [Coexpressed gene list for AT5G41560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249313_at
249313_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249313_at
249313_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249313_at
249313_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834158      
Refseq ID (protein) NP_001330332.1 
NP_198971.1 


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