[←][→] ath   AT5G41560 Gene
functional annotation
Function   DET1 complexing ubiquitin ligase  
GO BP
GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (38 genes)  IBA IMP  
GO:0009788 [list] [network] negative regulation of abscisic acid-activated signaling pathway  (54 genes)  IMP  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  IBA  
GO:0005654 [list] [network] nucleoplasm  (444 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IPI ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001330332.1  NP_198971.1 
BLAST NP_001330332.1  NP_198971.1 
Orthologous [Ortholog page] LOC4331465 (osa)  LOC11415365 (mtr)  LOC100241601 (vvi)  LOC100276556 (zma)  LOC100527830 (gma)  LOC100784555 (gma)  LOC101255014 (sly)  LOC103631233 (zma)  LOC103864090 (bra) 
Subcellular
localization
wolf
nucl 3,  chlo 3,  mito 3,  chlo_mito 3  (predict for NP_001330332.1)
nucl 9  (predict for NP_198971.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001330332.1)
chlo 8,  other 3  (predict for NP_198971.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath00190 Oxidative phosphorylation 2
ath04145 Phagosome 2
Genes directly connected with AT5G41560 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 AT5G55290 ATPase, V0 complex, subunit E [detail] 835622
7.1 AT5G22875 transmembrane protein [detail] 832351
6.3 AT5G40190 RNA ligase/cyclic nucleotide phosphodiesterase family protein [detail] 834017
6.1 AT4G13270 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [detail] 826957
4.7 UBC18 ubiquitin-conjugating enzyme 18 [detail] 834314
Coexpressed
gene list		 [Coexpressed gene list for AT5G41560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249313_at
249313_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249313_at
249313_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249313_at
249313_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834158      
Refseq ID (protein) NP_001330332.1 
NP_198971.1 


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