[][] ath   AT5G41790 Gene
functional annotation
Function   COP1-interactive protein 1
GO BP
GO:0042306 [list] [network] regulation of protein import into nucleus  (1 genes)  TAS  
GO:0071215 [list] [network] cellular response to abscisic acid stimulus  (223 genes)  IMP  
GO CC
GO:0005856 [list] [network] cytoskeleton  (368 genes)  IDA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001330520.1  NP_198994.2 
BLAST NP_001330520.1  NP_198994.2 
Orthologous [Ortholog page] AT1G64330 (ath)LOC25502158 (mtr)LOC25502161 (mtr)LOC100778046 (gma)LOC100812919 (gma)LOC101256404 (sly)LOC103838153 (bra)LOC103850230 (bra)LOC103855947 (bra)LOC103864122 (bra)
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1  (predict for NP_001330520.1)
nucl 4,  cyto 3,  chlo 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1  (predict for NP_198994.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001330520.1)
other 9  (predict for NP_198994.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CIP1 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.8 AT5G16730 weak chloroplast movement under blue light protein (DUF827) [detail] 831536
7.8 AT5G40450 A-kinase anchor-like protein [detail] 834043
7.7 AT4G26630 DEK domain-containing chromatin associated protein [detail] 828770
7.3 NET1D kinase interacting (KIP1-like) family protein [detail] 838350
5.6 AT3G14205 Phosphoinositide phosphatase family protein [detail] 820638
5.5 AT5G23760 Copper transport protein family [detail] 832441
Coexpressed
gene list
[Coexpressed gene list for CIP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249271_at
249271_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249271_at
249271_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
249271_at
249271_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 834184    
Refseq ID (protein) NP_001330520.1 
NP_198994.2 


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