[←][→] ath   At5g41870 Gene
functional annotation
Function   Pectin lyase-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (844 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (68 genes)  IEA  
KEGG
Protein NP_199002.1 
BLAST NP_199002.1 
Orthologous [Ortholog page] AT4G23820 (ath)  LOC4326618 (osa)  LOC4328920 (osa)  LOC4339762 (osa)  LOC7497842 (ppo)  LOC11437037 (mtr)  LOC25490549 (mtr)  LOC100785590 (gma)  LOC100816170 (gma)  LOC100818820 (gma)  LOC101258581 (sly)  LOC103850234 (bra)  LOC103861440 (bra)  LOC103861445 (bra)  LOC123070151 (tae)  LOC123078585 (tae)  LOC123443896 (hvu) 
Subcellular
localization
wolf
chlo 4,  cyto 1,  extr 1,  vacu 1,  nucl 1,  E.R. 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_199002.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_199002.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G41870 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.1 AT2G39750 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 818560
5.0 AT4G31650 Transcriptional factor B3 family protein [detail] 829293
4.9 AT1G34340 alpha/beta-Hydrolases superfamily protein [detail] 840335
Coexpressed
gene list		 [Coexpressed gene list for AT5G41870]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249275_at
249275_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249275_at
249275_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249275_at
249275_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834192      
Refseq ID (protein) NP_199002.1 


The preparation time of this page was 0.1 [sec].