ATTED-II : GeneID search result

[←][→] ath At5g42200 Gene

functional annotation

Function

RING/U-box superfamily protein

GO BP

GO:0071456 [list] [network] cellular response to hypoxia	(241 genes)	HEP
GO:0016567 [list] [network] protein ubiquitination	(434 genes)	IDA IEA

GO CC

GO MF

GO:0004842 [list] [network] ubiquitin-protein transferase activity

(261 genes)

IDA

KEGG

Protein

NP_199035.1

BLAST

NP_199035.1

Orthologous

[Ortholog page] LOC7490624 (ppo) LOC7493995 (ppo) LOC11432144 (mtr) LOC100776003 (gma) LOC100780203 (gma) LOC100811160 (gma) LOC100817919 (gma) LOC101245541 (sly) LOC101249449 (sly) LOC103832296 (bra) LOC120577925 (mtr)

Subcellular
localization
wolf

chlo 8, vacu 1

(predict for NP_199035.1)

Subcellular
localization
TargetP

other 7

(predict for NP_199035.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G42200 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.9	AT5G25240	stress induced protein	[detail]	832595
6.3	AT1G74940	cyclin-dependent kinase, putative (DUF581)	[detail]	843833
6.1	AT1G52140	Avr9/Cf-9 rapidly elicited protein	[detail]	841644
5.6	AT5G54980	Uncharacterized protein family (UPF0497)	[detail]	835589
5.4	AT5G01200	Duplicated homeodomain-like superfamily protein	[detail]	831676
4.2	AT4G28150	hypothetical protein (DUF789)	[detail]	828930

Coexpressed
gene list

[Coexpressed gene list for AT5G42200]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

249234_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

249234_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

249234_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834225
Refseq ID (protein)	NP_199035.1

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