[←][→] ath   At5g42200 Gene
functional annotation
Function   RING/U-box superfamily protein      
GO BP
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  HEP  
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IDA IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (261 genes)  IDA  
KEGG
Protein NP_199035.1 
BLAST NP_199035.1 
Orthologous [Ortholog page] LOC7490624 (ppo)  LOC7493995 (ppo)  LOC11432144 (mtr)  LOC100776003 (gma)  LOC100780203 (gma)  LOC100811160 (gma)  LOC100817919 (gma)  LOC101245541 (sly)  LOC101249449 (sly)  LOC103832296 (bra)  LOC120577925 (mtr) 
Subcellular
localization
wolf
chlo 8,  vacu 1  (predict for NP_199035.1)
Subcellular
localization
TargetP
other 7  (predict for NP_199035.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G42200 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.9 AT5G25240 stress induced protein [detail] 832595
6.3 AT1G74940 cyclin-dependent kinase, putative (DUF581) [detail] 843833
6.1 AT1G52140 Avr9/Cf-9 rapidly elicited protein [detail] 841644
5.6 AT5G54980 Uncharacterized protein family (UPF0497) [detail] 835589
5.4 AT5G01200 Duplicated homeodomain-like superfamily protein [detail] 831676
4.2 AT4G28150 hypothetical protein (DUF789) [detail] 828930
Coexpressed
gene list		 [Coexpressed gene list for AT5G42200]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249234_at
249234_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249234_at
249234_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249234_at
249234_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834225      
Refseq ID (protein) NP_199035.1 


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