ATTED-II : GeneID search result

[←][→] ath At5g42240 Gene

functional annotation

Function

serine carboxypeptidase-like 42

Plant GARDEN Plant GARDEN JBrowse

GO BP

GO:0051301 [list] [network] cell division

(442 genes)

IEA

GO CC

GO:0009505 [list] [network] plant-type cell wall	(498 genes)	HDA
GO:0005576 [list] [network] extracellular region	(3154 genes)	ISM

GO MF

KEGG

Protein

NP_199039.1

BLAST

NP_199039.1

Orthologous

[Ortholog page] SCPL43 (ath) scpl41 (ath) scpl44 (ath) LOC4350066 (osa) LOC7466415 (ppo) LOC11409958 (mtr) LOC11433806 (mtr) LOC25489767 (mtr) LOC100801752 (gma) LOC100803335 (gma) LOC100815723 (gma) LOC101252532 (sly) LOC101262410 (sly) LOC103833313 (bra) LOC103860365 (bra) LOC123086544 (tae) LOC123091381 (tae) LOC123096353 (tae) LOC123100212 (tae) LOC123447884 (hvu)

Subcellular
localization
wolf

vacu 5, chlo 1, extr 1, nucl 1, E.R. 1, golg 1, chlo_mito 1

(predict for NP_199039.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_199039.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with scpl42 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.2	AT4G09040	RNA-binding (RRM/RBD/RNP motifs) family protein	[detail]	826483
5.6	emb2737	embryo defective 2737	[detail]	835467
5.5	NACA2	nascent polypeptide-associated complex subunit alpha-like protein 2	[detail]	824109

Coexpressed
gene list

[Coexpressed gene list for scpl42]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

249216_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

249216_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

249216_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834229
Refseq ID (protein)	NP_199039.1

The preparation time of this page was 0.1 [sec].