[←][→] ath   At5g42860 Gene
functional annotation
Function   late embryogenesis abundant protein, group 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0042546 [list] [network] cell wall biogenesis  (399 genes)  IEA  
GO:0000902 [list] [network] cell morphogenesis  (474 genes)  IEA  
GO:0071669 [list] [network] plant-type cell wall organization or biogenesis  (489 genes)  IEA  
GO:0016049 [list] [network] cell growth  (527 genes)  IEA  
GO:0009753 [list] [network] response to jasmonic acid  (611 genes)  IEA  
GO:0009611 [list] [network] response to wounding  (816 genes)  IEA  
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IEA  
GO:0048364 [list] [network] root development  (1192 genes)  IEA  
GO:0019752 [list] [network] carboxylic acid metabolic process  (1307 genes)  IEA  
GO:0010035 [list] [network] response to inorganic substance  (2100 genes)  IEA  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (268 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_199100.1 
BLAST NP_199100.1 
Orthologous [Ortholog page] AT1G45688 (ath)  LOC4337491 (osa)  LOC7462873 (ppo)  LOC7483108 (ppo)  LOC11414391 (mtr)  LOC11418273 (mtr)  LOC18104872 (ppo)  LOC25493456 (mtr)  LOC100787767 (gma)  LOC100798077 (gma)  LOC100798888 (gma)  LOC100811519 (gma)  LOC100817451 (gma)  LOC101250111 (sly)  LOC101266178 (sly)  LOC103828054 (bra)  LOC103832175 (bra)  LOC103833105 (bra)  LOC103839276 (bra)  LOC103848363 (bra)  LOC103872855 (bra)  LOC123047558 (tae)  LOC123055362 (tae)  LOC123191178 (tae)  LOC123428524 (hvu) 
Subcellular
localization
wolf
nucl 3,  chlo 2,  plas 2,  cysk_nucl 2,  cyto 1,  mito 1,  vacu 1  (predict for NP_199100.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_199100.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G42860 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.3 MSR1 O-fucosyltransferase family protein [detail] 821672
6.9 AT3G06035 Glycoprotein membrane precursor GPI-anchored [detail] 819776
6.4 GH9B8 glycosyl hydrolase 9B8 [detail] 817861
4.8 RABA3 RAB GTPase homolog A3 [detail] 839493
Coexpressed
gene list		 [Coexpressed gene list for AT5G42860]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249167_at
249167_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249167_at
249167_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249167_at
249167_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834297      
Refseq ID (protein) NP_199100.1 


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