[←][→] ath   At5g42900 Gene
functional annotation
Function   cold regulated protein 27    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009646 [list] [network] response to absence of light  (50 genes)  IEP  
GO:0042752 [list] [network] regulation of circadian rhythm  (61 genes)  IMP  
GO:0009615 [list] [network] response to virus  (91 genes)  IEP  
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (94 genes)  IMP  
GO:0010114 [list] [network] response to red light  (101 genes)  IEP  
GO:0009637 [list] [network] response to blue light  (160 genes)  IEP  
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (205 genes)  IDA  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (287 genes)  IMP  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP IMP  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001031998.1  NP_568615.3  NP_851121.1 
BLAST NP_001031998.1  NP_568615.3  NP_851121.1 
Orthologous [Ortholog page] LOC4331855 (osa)  LOC4348520 (osa)  LOC7462882 (ppo)  LOC11412566 (mtr)  LOC18104891 (ppo)  LOC100781222 (gma)  LOC100814610 (gma)  LOC101253889 (sly)  LOC103828008 (bra)  LOC103839269 (bra)  LOC123052779 (tae)  LOC123081522 (tae)  LOC123089606 (tae)  LOC123093416 (tae)  LOC123094036 (tae)  LOC123098692 (tae)  LOC123099068 (tae)  LOC123099237 (tae)  LOC123106191 (tae)  LOC123108436 (tae)  LOC123120721 (tae)  LOC123447569 (hvu)  LOC123449635 (hvu) 
Subcellular
localization
wolf
nucl 5,  cyto_nucl 5,  cyto 4  (predict for NP_001031998.1)
nucl 5,  cyto_nucl 5,  cyto 4  (predict for NP_568615.3)
nucl 5,  cyto_nucl 5,  cyto 4  (predict for NP_851121.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_001031998.1)
other 8,  mito 3  (predict for NP_568615.3)
other 8,  mito 3  (predict for NP_851121.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
ath01240 Biosynthesis of cofactors 2
Genes directly connected with COR27 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
17.7 AT4G33980 uncharacterized protein [detail] 829544
16.1 COL9 CONSTANS-like 9 [detail] 819956
12.1 JMJD5 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 821629
12.0 BBX8 B-box type zinc finger protein with CCT domain-containing protein [detail] 834878
9.1 AT1G07050 CCT motif family protein [detail] 837216
8.2 HCAR coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family [detail] 839472
7.7 AT3G59350 Protein kinase superfamily protein [detail] 825104
4.9 AT4G19390 Uncharacterized protein family (UPF0114) [detail] 827680
Coexpressed
gene list		 [Coexpressed gene list for COR27]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249174_at
249174_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249174_at
249174_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249174_at
249174_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834301      
Refseq ID (protein) NP_001031998.1 
NP_568615.3 
NP_851121.1 


The preparation time of this page was 0.1 [sec].