| functional annotation |
| Function |
cold regulated protein 27 |
|
| GO BP |
|
GO:0009646 [list] [network] response to absence of light
|
(45 genes)
|
IEP
|
 |
|
GO:0042752 [list] [network] regulation of circadian rhythm
|
(57 genes)
|
IMP
|
|
|
GO:2000028 [list] [network] regulation of photoperiodism, flowering
|
(63 genes)
|
IMP
|
|
|
GO:0010114 [list] [network] response to red light
|
(74 genes)
|
IEP
|
|
|
GO:0009615 [list] [network] response to virus
|
(81 genes)
|
IEP
|
|
|
GO:0009637 [list] [network] response to blue light
|
(98 genes)
|
IEP
|
|
|
GO:0080167 [list] [network] response to karrikin
|
(128 genes)
|
IEP
|
|
|
GO:0048511 [list] [network] rhythmic process
|
(131 genes)
|
IEA
|
|
|
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem
|
(173 genes)
|
IMP
|
|
|
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated
|
(253 genes)
|
IDA
|
|
|
GO:0009409 [list] [network] response to cold
|
(411 genes)
|
IEP
IMP
|
|
|
GO:0009737 [list] [network] response to abscisic acid
|
(574 genes)
|
IEP
|
|
|
| GO CC |
|
| GO MF |
|
| KEGG |
|
|
| Protein |
NP_001031998.1
NP_568615.3
NP_851121.1
|
| BLAST |
NP_001031998.1
NP_568615.3
NP_851121.1
|
| Orthologous |
[Ortholog page]
LOC4331855 (osa)
LOC4348520 (osa)
LOC7462882 (ppo)
LOC11412566 (mtr)
LOC100192612 (zma)
LOC100193895 (zma)
LOC100255572 (vvi)
LOC100267847 (vvi)
LOC100274071 (zma)
LOC100781222 (gma)
LOC100814610 (gma)
LOC100854716 (vvi)
LOC101253889 (sly)
LOC103828008 (bra)
LOC103839269 (bra)
|
Subcellular
localization
wolf |
|
nucl 5,
cyto_nucl 5,
cyto 4
|
(predict for NP_001031998.1)
|
|
nucl 5,
cyto_nucl 5,
cyto 4
|
(predict for NP_568615.3)
|
|
nucl 5,
cyto_nucl 5,
cyto 4
|
(predict for NP_851121.1)
|
|
Subcellular
localization
TargetP |
|
other 8,
mito 3
|
(predict for NP_001031998.1)
|
|
other 8,
mito 3
|
(predict for NP_568615.3)
|
|
other 8,
mito 3
|
(predict for NP_851121.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath04712 |
Circadian rhythm - plant |
3 |
 |
Genes directly connected with COR27 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 16.8 |
AT4G33980 |
hypothetical protein |
[detail] |
829544 |
| 14.8 |
COL9 |
CONSTANS-like 9 |
[detail] |
819956 |
| 11.8 |
BBX8 |
B-box type zinc finger protein with CCT domain-containing protein |
[detail] |
834878 |
| 10.7 |
JMJD5 |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
[detail] |
821629 |
| 9.6 |
AT1G07050 |
CCT motif family protein |
[detail] |
837216 |
| 8.0 |
HCAR |
coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family |
[detail] |
839472 |
| 7.7 |
AT3G59350 |
Protein kinase superfamily protein |
[detail] |
825104 |
| 7.4 |
AT4G27130 |
Translation initiation factor SUI1 family protein |
[detail] |
828821 |
| 6.2 |
AT2G38465 |
hypothetical protein |
[detail] |
818428 |
| 5.3 |
MT2A |
metallothionein 2A |
[detail] |
820098 |
| 4.6 |
AT4G19390 |
Uncharacterized protein family (UPF0114) |
[detail] |
827680 |
|
Coexpressed
gene list |
[Coexpressed gene list for COR27]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
249174_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
249174_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
249174_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT5G42900 Gene
