[←][→] ath   At5g43380 Gene
functional annotation
Function   type one serine/threonine protein phosphatase 6    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006470 [list] [network] protein dephosphorylation  (50 genes)  ISS  
GO:0007568 [list] [network] aging  (67 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0004722 [list] [network] protein serine/threonine phosphatase activity  (78 genes)  ISS  
KEGG ath03015 [list] [network] mRNA surveillance pathway (119 genes)
Protein NP_001032000.1  NP_568625.1  NP_851123.1 
BLAST NP_001032000.1  NP_568625.1  NP_851123.1 
Orthologous [Ortholog page] TOPP1 (ath)  TOPP4 (ath)  TOPP9 (ath)  TOPP5 (ath)  TOPP7 (ath)  TOPP8 (ath)  TOPP2 (ath)  TOPP3 (ath)  LOC4326473 (osa)  LOC4331166 (osa)  LOC4332369 (osa)  LOC4340228 (osa)  LOC7458113 (ppo)  LOC7465083 (ppo)  LOC7465940 (ppo)  LOC7468609 (ppo)  LOC7474621 (ppo)  LOC7478936 (ppo)  LOC7479289 (ppo)  LOC7482623 (ppo)  LOC7487983 (ppo)  LOC11406064 (mtr)  LOC11413712 (mtr)  LOC11419847 (mtr)  LOC11424441 (mtr)  LOC11425683 (mtr)  LOC11431740 (mtr)  LOC11432243 (mtr)  LOC18098653 (ppo)  LOC18100039 (ppo)  LOC18101604 (ppo)  LOC25502117 (mtr)  LOC100780047 (gma)  LOC100783178 (gma)  LOC100790490 (gma)  LOC100791655 (gma)  LOC100794578 (gma)  LOC100799218 (gma)  LOC100803420 (gma)  LOC100804212 (gma)  LOC100805030 (gma)  LOC100807069 (gma)  LOC100808597 (gma)  LOC100811593 (gma)  LOC100813763 (gma)  LOC100813792 (gma)  LOC100816262 (gma)  LOC101243716 (sly)  LOC101249363 (sly)  LOC101249463 (sly)  LOC101251329 (sly)  LOC101254698 (sly)  LOC101258308 (sly)  LOC101260053 (sly)  LOC103827974 (bra)  LOC103833886 (bra)  LOC103838234 (bra)  LOC103845343 (bra)  LOC103849913 (bra)  LOC103851601 (bra)  LOC103854676 (bra)  LOC103856650 (bra)  LOC103857886 (bra)  LOC103858272 (bra)  LOC103858598 (bra)  LOC103859101 (bra)  LOC103868042 (bra)  LOC103870808 (bra)  LOC103873291 (bra)  LOC103874509 (bra)  LOC123061205 (tae)  LOC123069823 (tae)  LOC123085402 (tae)  LOC123087447 (tae)  LOC123092633 (tae)  LOC123097940 (tae)  LOC123113707 (tae)  LOC123114478 (tae)  LOC123123896 (tae)  LOC123129028 (tae)  LOC123129080 (tae)  LOC123139901 (tae)  LOC123139976 (tae)  LOC123142212 (tae)  LOC123148625 (tae)  LOC123156575 (tae)  LOC123164782 (tae)  LOC123180557 (tae)  LOC123191618 (tae)  LOC123399686 (hvu)  LOC123404067 (hvu)  LOC123406244 (hvu)  LOC123407142 (hvu)  LOC123425874 (hvu)  LOC123443630 (hvu)  LOC123449051 (hvu) 
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  mito 1,  plas 1,  cysk_nucl 1,  mito_plas 1  (predict for NP_001032000.1)
cyto 4,  chlo 3,  cyto_nucl 3  (predict for NP_568625.1)
nucl 4,  cyto 3,  chlo 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_851123.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001032000.1)
other 8  (predict for NP_568625.1)
other 8  (predict for NP_851123.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00562 Inositol phosphate metabolism 2
ath04070 Phosphatidylinositol signaling system 2
Genes directly connected with TOPP6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.5 ARFB1A ADP-ribosylation factor B1A [detail] 816020
8.9 AT3G15650 alpha/beta-Hydrolases superfamily protein [detail] 820808
8.9 HIPP21 Heavy metal transport/detoxification superfamily protein [detail] 831611
8.8 DAR2 DA1-related protein 2 [detail] 818570
6.9 PLC5 phosphatidylinositol-speciwc phospholipase C5 [detail] 835983
6.7 HAM4 GRAS family transcription factor [detail] 829824
6.5 AT5G05365 Heavy metal transport/detoxification superfamily protein [detail] 5008200
6.4 AT3G16330 Avr9/Cf-9 rapidly elicited protein [detail] 820880
6.1 AT1G64700 DUF4228 domain protein [detail] 842778
5.7 AT1G51340 MATE efflux family protein [detail] 841557
5.3 ATC centroradiali [detail] 817302
4.8 AT3G43270 Plant invertase/pectin methylesterase inhibitor superfamily [detail] 823402
Coexpressed
gene list		 [Coexpressed gene list for TOPP6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249126_at
249126_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249126_at
249126_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249126_at
249126_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834356      
Refseq ID (protein) NP_001032000.1 
NP_568625.1 
NP_851123.1 


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