[←][→] ath   AT5G43380 Gene
functional annotation
Function   type one serine/threonine protein phosphatase 6  
GO BP
GO:0006470 [list] [network] protein dephosphorylation  (133 genes)  ISS  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA ISM  
GO MF
GO:0004722 [list] [network] protein serine/threonine phosphatase activity  (113 genes)  IBA ISS  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03015 [list] [network] mRNA surveillance pathway (115 genes)
Protein NP_001032000.1  NP_568625.1  NP_851123.1 
BLAST NP_001032000.1  NP_568625.1  NP_851123.1 
Orthologous [Ortholog page] LOC542269 (zma)  TOPP1 (ath)  TOPP4 (ath)  TOPP9 (ath)  TOPP5 (ath)  TOPP7 (ath)  TOPP8 (ath)  TOPP2 (ath)  TOPP3 (ath)  LOC4326473 (osa)  LOC4331166 (osa)  LOC4332369 (osa)  LOC4340228 (osa)  LOC7458113 (ppo)  LOC7478936 (ppo)  LOC7479289 (ppo)  LOC7487983 (ppo)  LOC11406064 (mtr)  LOC11413712 (mtr)  LOC11419847 (mtr)  LOC11424441 (mtr)  LOC11425683 (mtr)  LOC11431740 (mtr)  LOC11432243 (mtr)  LOC25502117 (mtr)  LOC100191199 (zma)  LOC100216757 (zma)  LOC100217163 (zma)  LOC100240794 (vvi)  LOC100240815 (vvi)  LOC100250219 (vvi)  LOC100256994 (vvi)  LOC100258649 (vvi)  LOC100259840 (vvi)  LOC100263930 (vvi)  LOC100272981 (zma)  LOC100282306 (zma)  LOC100283013 (zma)  LOC100284227 (zma)  LOC100780047 (gma)  LOC100783178 (gma)  LOC100790490 (gma)  LOC100791655 (gma)  LOC100799218 (gma)  LOC100804212 (gma)  LOC100805030 (gma)  LOC100807069 (gma)  LOC100808597 (gma)  LOC100811593 (gma)  LOC100816262 (gma)  LOC101243716 (sly)  LOC101249363 (sly)  LOC101249463 (sly)  LOC101251329 (sly)  LOC101254698 (sly)  LOC101258308 (sly)  LOC101260053 (sly)  LOC103634267 (zma)  LOC103635487 (zma)  LOC103827974 (bra)  LOC103833886 (bra)  LOC103838234 (bra)  LOC103845343 (bra)  LOC103849914 (bra)  LOC103851601 (bra)  LOC103854676 (bra)  LOC103856650 (bra)  LOC103857886 (bra)  LOC103858272 (bra)  LOC103858598 (bra)  LOC103859101 (bra)  LOC103868042 (bra)  LOC103870808 (bra)  LOC103873291 (bra)  LOC103874509 (bra) 
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  mito 1,  plas 1,  cysk_nucl 1,  mito_plas 1  (predict for NP_001032000.1)
cyto 4,  chlo 3,  cyto_nucl 3  (predict for NP_568625.1)
nucl 4,  cyto 3,  chlo 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_851123.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001032000.1)
other 8  (predict for NP_568625.1)
other 8  (predict for NP_851123.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00562 Inositol phosphate metabolism 2
ath04070 Phosphatidylinositol signaling system 2
ath04933 AGE-RAGE signaling pathway in diabetic complications 2
Genes directly connected with TOPP6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.6 AT3G15650 alpha/beta-Hydrolases superfamily protein [detail] 820808
8.3 ARFB1A ADP-ribosylation factor B1A [detail] 816020
7.5 DAR2 DA1-related protein 2 [detail] 818570
6.5 AT5G05365 Heavy metal transport/detoxification superfamily protein [detail] 5008200
6.4 PLC5 phosphatidylinositol-speciwc phospholipase C5 [detail] 835983
6.3 HAM4 GRAS family transcription factor [detail] 829824
5.7 AT1G51340 MATE efflux family protein [detail] 841557
5.3 AT3G16330 Avr9/Cf-9 rapidly elicited protein [detail] 820880
5.0 AT1G64700 DUF4228 domain protein [detail] 842778
4.9 ATC centroradiali [detail] 817302
Coexpressed
gene list		 [Coexpressed gene list for TOPP6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249126_at
249126_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249126_at
249126_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249126_at
249126_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834356      
Refseq ID (protein) NP_001032000.1 
NP_568625.1 
NP_851123.1 


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