[][] ath   AT5G43780 Gene
functional annotation
Function   Pseudouridine synthase/archaeosine transglycosylase-like family protein
GO BP
GO:0070814 [list] [network] hydrogen sulfide biosynthetic process  (8 genes)  IEA  
GO:0000103 [list] [network] sulfate assimilation  (20 genes)  IBA TAS  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO MF
GO:0004781 [list] [network] sulfate adenylyltransferase (ATP) activity  (4 genes)  IMP ISS  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath00230 [list] [network] Purine metabolism (100 genes)
ath00261 [list] [network] Monobactam biosynthesis (14 genes)
ath00450 [list] [network] Selenocompound metabolism (18 genes)
ath00920 [list] [network] Sulfur metabolism (42 genes)
Protein NP_199191.1 
BLAST NP_199191.1 
Orthologous [Ortholog page] LOC547634 (gma)APS1 (ath)APS2 (ath)LOC4334073 (osa)LOC4334932 (osa)LOC7473435 (ppo)LOC7474170 (ppo)LOC7490658 (ppo)LOC7493954 (ppo)LOC25485115 (mtr)LOC25495488 (mtr)LOC100252345 (vvi)LOC100259752 (vvi)LOC100281036 (zma)LOC100805275 (gma)LOC100817530 (gma)LOC101256255 (sly)LOC101256557 (sly)LOC101259979 (sly)LOC103625889 (zma)LOC103643994 (zma)LOC103827954 (bra)LOC103835822 (bra)LOC103859979 (bra)LOC103868958 (bra)LOC103871853 (bra)LOC103872801 (bra)
Subcellular
localization
wolf
chlo 7,  mito 3  (predict for NP_199191.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_199191.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00564 Glycerophospholipid metabolism 2
Genes directly connected with APS4 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
4.9 AT3G30390 Transmembrane amino acid transporter family protein [detail] 822740
4.7 AT3G14280 LL-diaminopimelate aminotransferase [detail] 820648
4.3 AT1G16180 Serinc-domain containing serine and sphingolipid biosynthesis protein [detail] 838187
Coexpressed
gene list
[Coexpressed gene list for APS4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249112_at
249112_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249112_at
249112_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
249112_at
249112_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 834400    
Refseq ID (protein) NP_199191.1 


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