ATTED-II : GeneID search result

[←][→] ath At5g43790 Gene

functional annotation

Function

Pentatricopeptide repeat (PPR) superfamily protein

GO BP

GO:0009892 [list] [network] negative regulation of metabolic process	(1067 genes)	IEA
GO:0044248 [list] [network] cellular catabolic process	(1086 genes)	IEA
GO:1901575 [list] [network] organic substance catabolic process	(1156 genes)	IEA
GO:0050793 [list] [network] regulation of developmental process	(1250 genes)	IEA

GO CC

GO:0009507 [list] [network] chloroplast

(5004 genes)

ISM

GO MF

KEGG

Protein

NP_199192.1

BLAST

NP_199192.1

Orthologous

[Ortholog page] LOC9267687 (osa) LOC11440274 (mtr) LOC100804311 (gma) LOC101251308 (sly) LOC103827952 (bra) LOC107277436 (osa) LOC123083851 (tae) LOC123091624 (tae) LOC123096549 (tae) LOC123450365 (hvu)

Subcellular
localization
wolf

chlo 7, mito 2, cyto_mito 1

(predict for NP_199192.1)

Subcellular
localization
TargetP

other 3

(predict for NP_199192.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G43790 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.0	AT1G12620	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	837818
5.9	AT3G60050	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	825175
5.9	AT4G01570	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	828133

Coexpressed
gene list

[Coexpressed gene list for AT5G43790]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

249113_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

249113_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

249113_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834401
Refseq ID (protein)	NP_199192.1

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