ATTED-II : GeneID search result

[←][→] ath AT5G43810 Gene

functional annotation

Function

Stabilizer of iron transporter SufD / Polynucleotidyl transferase

GO BP

GO:0035019 [list] [network] somatic stem cell population maintenance	(1 genes)	IMP
GO:0010586 [list] [network] miRNA metabolic process	(7 genes)	IMP
GO:1902183 [list] [network] regulation of shoot apical meristem development	(10 genes)	IMP
GO:0009934 [list] [network] regulation of meristem structural organization	(21 genes)	IMP
GO:0051607 [list] [network] defense response to virus	(44 genes)	IDA
GO:0006417 [list] [network] regulation of translation	(146 genes)	IEA
GO:0031047 [list] [network] gene silencing by RNA	(183 genes)	IEA
GO:0007275 [list] [network] multicellular organism development	(2714 genes)	IEA

GO CC

GO:0009536 [list] [network] plastid	(5519 genes)	HDA
GO:0005737 [list] [network] cytoplasm	(14855 genes)	IDA ISM ISS

GO MF

GO:0035198 [list] [network] miRNA binding	(6 genes)	IDA
GO:0003743 [list] [network] translation initiation factor activity	(95 genes)	ISS
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

Protein

NP_001190464.1 NP_001331599.1 NP_001331600.1 NP_199194.1

BLAST

NP_001190464.1 NP_001331599.1 NP_001331600.1 NP_199194.1

Orthologous

[Ortholog page] AGO5 (ath) AGO1 (ath) LOC4330281 (osa) LOC4331253 (osa) LOC4333733 (osa) LOC4334374 (osa) LOC4334449 (osa) LOC4342138 (osa) LOC4343201 (osa) LOC7454033 (ppo) LOC7463340 (ppo) LOC7467512 (ppo) LOC7472995 (ppo) LOC9269490 (osa) LOC9270411 (osa) LOC11409042 (mtr) LOC11437713 (mtr) LOC25482951 (mtr) LOC25485122 (mtr) LOC25486828 (mtr) LOC25492353 (mtr) LOC25492354 (mtr) LOC25497351 (mtr) LOC100193970 (zma) LOC100244311 (vvi) LOC100253740 (vvi) LOC100256320 (vvi) LOC100258447 (vvi) LOC100268067 (vvi) LOC100304327 (zma) LOC100384259 (zma) LOC100384364 (zma) LOC100778754 (gma) LOC100780375 (gma) LOC100798086 (gma) AGO5 (gma) LOC100805246 (gma) LOC100807513 (gma) LOC100808457 (gma) LOC100810235 (gma) LOC100813485 (gma) LOC100816999 (gma) LOC100819073 (gma) LOC101247032 (sly) AGO1B (sly) LOC101259671 (sly) AGO10 (sly) LOC103625809 (zma) LOC103626484 (zma) LOC103629289 (zma) LOC103629795 (zma) LOC103633113 (zma) LOC103641968 (zma) LOC103647664 (zma) LOC103827949 (bra) LOC103829691 (bra) LOC103833004 (bra) LOC103868679 (bra) LOC107275269 (osa)

Subcellular
localization
wolf

nucl 6, cyto 3, cysk_nucl 3, nucl_plas 3	(predict for NP_001190464.1)
nucl 6, cyto 3, cysk_nucl 3, nucl_plas 3	(predict for NP_001331599.1)
nucl 6, cyto 3, cysk_nucl 3, nucl_plas 3	(predict for NP_001331600.1)
nucl 6, cyto 3, cysk_nucl 3, nucl_plas 3	(predict for NP_199194.1)

Subcellular
localization
TargetP

other 6, chlo 3	(predict for NP_001190464.1)
other 6, chlo 3	(predict for NP_001331599.1)
other 6, chlo 3	(predict for NP_001331600.1)
other 6, chlo 3	(predict for NP_199194.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	RNA transport	3

Genes directly connected with AGO10 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.1	AGO4	Argonaute family protein	[detail]	817246
5.6	SFC	ARF GTPase-activating protein	[detail]	831171
5.6	AT2G45340	Leucine-rich repeat protein kinase family protein	[detail]	819142

Coexpressed
gene list

[Coexpressed gene list for AGO10]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

249115_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

249115_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

249115_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834403
Refseq ID (protein)	NP_001190464.1
	NP_001331599.1
	NP_001331600.1
	NP_199194.1

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