[←][→] ath   At5g43880 Gene
functional annotation
Function   methyl-coenzyme M reductase II subunit gamma, putative (DUF3741)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0051301 [list] [network] cell division  (442 genes)  IEA  
GO:0048507 [list] [network] meristem development  (457 genes)  IEA  
GO:0019748 [list] [network] secondary metabolic process  (766 genes)  IEA  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IEA  
GO:0048589 [list] [network] developmental growth  (1060 genes)  IEA  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IEA  
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001332578.1  NP_001332579.1  NP_001332580.1  NP_199201.1 
BLAST NP_001332578.1  NP_001332579.1  NP_001332580.1  NP_199201.1 
Orthologous [Ortholog page] TRM17 (ath)  TRM20 (ath)  LOC4331592 (osa)  LOC4336344 (osa)  LOC7459526 (ppo)  LOC11425227 (mtr)  LOC25484161 (mtr)  LOC100787955 (gma)  LOC100793360 (gma)  LOC100814302 (gma)  LOC100816611 (gma)  TRM17/20b (sly)  TRM17/20a (sly)  LOC103839223 (bra)  LOC103854122 (bra)  LOC123045972 (tae)  LOC123053850 (tae)  LOC123093471 (tae)  LOC123098750 (tae)  LOC123427194 (hvu)  LOC123449683 (hvu) 
Subcellular
localization
wolf
chlo 6,  nucl 1,  E.R. 1,  plas 1,  extr 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001332578.1)
chlo 6,  nucl 1,  E.R. 1,  plas 1,  extr 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001332579.1)
chlo 6,  nucl 1,  E.R. 1,  plas 1,  extr 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001332580.1)
chlo 6,  nucl 1,  E.R. 1,  plas 1,  extr 1,  cyto_nucl 1,  cysk_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_199201.1)
Subcellular
localization
TargetP
mito 7  (predict for NP_001332578.1)
mito 7  (predict for NP_001332579.1)
mito 7  (predict for NP_001332580.1)
mito 7  (predict for NP_199201.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TRM21 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.9 NDL2 N-MYC downregulated-like 2 [detail] 831051
5.6 CESA5 cellulose synthase 5 [detail] 830847
5.3 AT5G18500 Protein kinase superfamily protein [detail] 831968
5.0 IQD23 IQ-domain 23 [detail] 836327
4.6 NUDX1 nudix hydrolase 1 [detail] 843207
4.4 AT1G71710 DNAse I-like superfamily protein [detail] 843501
Coexpressed
gene list		 [Coexpressed gene list for TRM21]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249093_at
249093_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249093_at
249093_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249093_at
249093_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834410      
Refseq ID (protein) NP_001332578.1 
NP_001332579.1 
NP_001332580.1 
NP_199201.1 


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