[←][→] ath   AT5G44340 Gene
functional annotation
Function   tubulin beta chain 4  
GO BP
GO:0000226 [list] [network] microtubule cytoskeleton organization  (134 genes)  IBA  
GO:0007017 [list] [network] microtubule-based process  (183 genes)  IBA  
GO:0000278 [list] [network] mitotic cell cycle  (198 genes)  IBA  
GO CC
GO:0045298 [list] [network] tubulin complex  (13 genes)  ISS  
GO:0005874 [list] [network] microtubule  (186 genes)  IBA  
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA ISM  
GO MF
GO:0005200 [list] [network] structural constituent of cytoskeleton  (30 genes)  IBA ISS  
GO:0003924 [list] [network] GTPase activity  (169 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (248 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04145 [list] [network] Phagosome (82 genes)
Protein NP_199247.1 
BLAST NP_199247.1 
Orthologous [Ortholog page] LOC542239 (zma)  LOC542380 (zma)  LOC542416 (zma)  LOC542417 (zma)  LOC542418 (zma)  LOC542705 (zma)  TUBB3 (gma)  TUBB (gma)  TUB (sly)  TUB7 (ath)  TUB9 (ath)  TUB6 (ath)  TUB8 (ath)  TUB2 (ath)  TUB3 (ath)  TUB5 (ath)  TUB1 (ath)  LOC4326917 (osa)  LOC4327550 (osa)  LOC4328420 (osa)  LOC4331315 (osa)  LOC4333632 (osa)  LOC4334309 (osa)  LOC4338790 (osa)  LOC4341810 (osa)  LOC7464075 (ppo)  LOC7465852 (ppo)  LOC7465861 (ppo)  LOC7471684 (ppo)  LOC7472769 (ppo)  LOC7477677 (ppo)  LOC7479116 (ppo)  LOC7479658 (ppo)  LOC7481503 (ppo)  LOC7486729 (ppo)  LOC11414871 (mtr)  LOC11415767 (mtr)  LOC11422693 (mtr)  LOC11425110 (mtr)  LOC11437601 (mtr)  LOC11438618 (mtr)  LOC11439086 (mtr)  LOC11442516 (mtr)  LOC25491473 (mtr)  LOC25493371 (mtr)  LOC100244399 (vvi)  LOC100244729 (vvi)  LOC100247828 (vvi)  LOC100258042 (vvi)  LOC100259087 (vvi)  LOC100259401 (vvi)  LOC100259534 (vvi)  LOC100260443 (vvi)  LOC100261736 (vvi)  LOC100265052 (vvi)  LOC100272336 (zma)  LOC100273658 (zma)  LOC100382290 (zma)  LOC100383576 (zma)  LOC100502086 (zma)  TUBB1 (gma)  LOC100781043 (gma)  LOC100781525 (gma)  LOC100784236 (gma)  LOC100788253 (gma)  LOC100793406 (gma)  LOC100797652 (gma)  LOC100797894 (gma)  LOC100798849 (gma)  LOC100801608 (gma)  TUBB2 (gma)  LOC100816898 (gma)  LOC100818878 (gma)  LOC100819408 (gma)  LOC100819883 (gma)  LOC101246411 (sly)  LOC101248630 (sly)  LOC101248956 (sly)  LOC101251552 (sly)  LOC101252240 (sly)  LOC101253952 (sly)  LOC101262621 (sly)  LOC101262728 (sly)  LOC101265829 (sly)  LOC103625832 (zma)  LOC103629648 (zma)  LOC103827910 (bra)  LOC103832026 (bra)  LOC103834176 (bra)  LOC103839187 (bra)  LOC103846653 (bra)  LOC103848440 (bra)  LOC103858467 (bra)  LOC103861207 (bra)  LOC103864974 (bra)  LOC103867806 (bra)  LOC103868027 (bra)  LOC103873285 (bra)  LOC103873591 (bra)  LOC103873913 (bra)  LOC103874246 (bra)  LOC103874709 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 4,  vacu 1,  cysk 1  (predict for NP_199247.1)
Subcellular
localization
TargetP
other 8  (predict for NP_199247.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 9
ath00100 Steroid biosynthesis 2
Genes directly connected with TUB4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.9 TUB9 tubulin beta-9 chain [detail] 827837
9.0 TUA3 tubulin alpha-3 [detail] 832097
8.6 ACT2 actin 2 [detail] 821411
7.3 AXS1 UDP-D-apiose/UDP-D-xylose synthase 1 [detail] 817332
7.0 TUA6 Tubulin/FtsZ family protein [detail] 827154
6.8 TUA5 tubulin alpha-5 [detail] 832098
6.7 SMT1 sterol methyltransferase 1 [detail] 831216
Coexpressed
gene list		 [Coexpressed gene list for TUB4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
249049_at
249049_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
249049_at
249049_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
249049_at
249049_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834459      
Refseq ID (protein) NP_199247.1 


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