[←][→] ath   At5g45250 Gene
functional annotation
Function   Disease resistance protein (TIR-NBS-LRR class) family    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0002758 [list] [network] innate immune response-activating signaling pathway  (38 genes)  IDA  
GO:0009626 [list] [network] plant-type hypersensitive response  (46 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IDA  
GO:0006952 [list] [network] defense response  (2370 genes)  TAS  
GO CC
GO:0012505 [list] [network] endomembrane system  (2093 genes)  IDA  
GO:0016020 [list] [network] membrane  (3629 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0050135 [list] [network] NAD(P)+ nucleosidase activity  (29 genes)  IEA  
GO:0061809 [list] [network] NAD+ nucleotidase, cyclic ADP-ribose generating  (30 genes)  IEA  
GO:0043531 [list] [network] ADP binding  (164 genes)  IEA  
GO:0042802 [list] [network] identical protein binding  (404 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04626 [list] [network] Plant-pathogen interaction (204 genes)
Protein NP_199338.1 
BLAST NP_199338.1 
Orthologous [Ortholog page] AT5G45060 (ath)  LOC103839132 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_199338.1)
Subcellular
localization
TargetP
other 8  (predict for NP_199338.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with RPS4 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.6 RRS1 Disease resistance protein (TIR-NBS-LRR class) [detail] 834562
6.9 LAZ5 Disease resistance protein (TIR-NBS-LRR class) family [detail] 834517
6.7 PAPS2 poly(A) polymerase 2 [detail] 817127
6.2 ABCG24 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 841775
6.0 AT4G25940 ENTH/ANTH/VHS superfamily protein [detail] 828700
Coexpressed
gene list		 [Coexpressed gene list for RPS4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248994_at
248994_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248994_at
248994_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248994_at
248994_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834561      
Refseq ID (protein) NP_199338.1 


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