[←][→] ath   At5g46410 Gene
functional annotation
Function   SCP1-like small phosphatase 4    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006470 [list] [network] protein dephosphorylation  (50 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0008420 [list] [network] RNA polymerase II CTD heptapeptide repeat phosphatase activity  (4 genes)  IDA  
KEGG
Protein NP_001119383.1  NP_001332006.1  NP_199453.2 
BLAST NP_001119383.1  NP_001332006.1  NP_199453.2 
Orthologous [Ortholog page] SSP4b (ath)  LOC4326666 (osa)  LOC7471836 (ppo)  LOC11411659 (mtr)  LOC18095283 (ppo)  LOC100786602 (gma)  LOC100799803 (gma)  LOC101254863 (sly)  LOC103827734 (bra)  LOC123061544 (tae)  LOC123070180 (tae)  LOC123078623 (tae)  LOC123443925 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  golg_plas 1  (predict for NP_001119383.1)
cyto 4,  nucl 3,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  golg_plas 1  (predict for NP_001332006.1)
cyto 4,  nucl 3,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  golg_plas 1  (predict for NP_199453.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001119383.1)
other 6  (predict for NP_001332006.1)
other 6  (predict for NP_199453.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SSP4 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.1 SSP4b SCP1-like small phosphatase 4b [detail] 827539
6.9 AT4G32440 Plant Tudor-like RNA-binding protein [detail] 829379
6.1 AT5G63370 Protein kinase superfamily protein [detail] 836456
5.3 AT4G36648 [detail] 5008185
Coexpressed
gene list		 [Coexpressed gene list for SSP4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248901_at
248901_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248901_at
248901_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248901_at
248901_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834684      
Refseq ID (protein) NP_001119383.1 
NP_001332006.1 
NP_199453.2 


The preparation time of this page was 0.1 [sec].