ATTED-II : GeneID search result

[←][→] ath AT5G46420 Gene

functional annotation

Function

16S rRNA processing protein RimM family

GO BP

GO:0006048 [list] [network] UDP-N-acetylglucosamine biosynthetic process	(6 genes)	IBA
GO:0006364 [list] [network] rRNA processing	(276 genes)	IEA

GO CC

GO:0005840 [list] [network] ribosome	(463 genes)	IEA
GO:0009507 [list] [network] chloroplast	(5095 genes)	IDA ISM

GO MF

GO:0003977 [list] [network] UDP-N-acetylglucosamine diphosphorylase activity	(3 genes)	IBA
GO:0043022 [list] [network] ribosome binding	(43 genes)	IEA

KEGG

Protein

NP_568663.2

BLAST

NP_568663.2

Orthologous

[Ortholog page] LOC4339632 (osa) LOC11418018 (mtr) LOC100251997 (vvi) LOC100501868 (zma) LOC100800702 (gma) LOC100802788 (gma) LOC101255162 (sly) LOC103827733 (bra)

Subcellular
localization
wolf

chlo 7, nucl 2

(predict for NP_568663.2)

Subcellular
localization
TargetP

chlo 9

(predict for NP_568663.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00970	Aminoacyl-tRNA biosynthesis	4
ath03013	RNA transport	2

Genes directly connected with AT5G46420 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
7.9	PRORP1	proteinaceous RNase P 1	[detail]	817782
7.9	CFM2	CRM family member 2	[detail]	821288
7.3	GATB	GLU-ADT subunit B	[detail]	841273

Coexpressed
gene list

[Coexpressed gene list for AT5G46420]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248906_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248906_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248906_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834685
Refseq ID (protein)	NP_568663.2

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