[←][→] ath   AT5G46580 Gene
functional annotation
Function   pentatricopeptide (PPR) repeat-containing protein  
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
KEGG
Protein NP_199470.1 
BLAST NP_199470.1 
Orthologous [Ortholog page] LOC4334836 (osa)  LOC11409834 (mtr)  LOC100191385 (zma)  LOC100259066 (vvi)  LOC100780994 (gma)  LOC100796315 (gma)  LOC101264145 (sly)  LOC103827727 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 2,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_199470.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for NP_199470.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G46580 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.0 FLN1 fructokinase-like 1 [detail] 824576
12.9 FLN2 fructokinase-like protein [detail] 843251
12.0 BSM Mitochondrial transcription termination factor family protein [detail] 828116
10.8 AT3G12930 Lojap-related protein [detail] 820478
10.6 BPG2 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 824885
9.3 SVR7 pentatricopeptide (PPR) repeat-containing protein [detail] 827333
8.6 MEE40 Pentatricopeptide repeat (PPR) superfamily protein [detail] 824537
8.2 NOA1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 823899
7.2 AT3G04650 FAD/NAD(P)-binding oxidoreductase family protein [detail] 819623
6.4 PTAC15 plastid transcriptionally active 15 [detail] 835506
Coexpressed
gene list		 [Coexpressed gene list for AT5G46580]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248854_at
248854_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248854_at
248854_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248854_at
248854_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834701      
Refseq ID (protein) NP_199470.1 


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