ATTED-II : GeneID search result

[←][→] ath At5g46830 Gene

functional annotation

Function

calcium-binding transcription factor NIG1

GO BP

GO:0042538 [list] [network] hyperosmotic salinity response	(58 genes)	IMP
GO:0009651 [list] [network] response to salt stress	(607 genes)	IEP
GO:0006355 [list] [network] regulation of DNA-templated transcription	(1656 genes)	TAS

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

IDA ISM

GO MF

GO:0005509 [list] [network] calcium ion binding	(132 genes)	IDA
GO:0003677 [list] [network] DNA binding	(1277 genes)	IDA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1576 genes)	ISS TAS

KEGG

Protein

NP_199495.1

BLAST

NP_199495.1

Orthologous

[Ortholog page] MYC2 (sly) MYC4 (ath) MYC3 (ath) MYC2 (ath) LOC4349484 (osa) LOC7465343 (ppo) LOC7477819 (ppo) LOC7478791 (ppo) LOC7492804 (ppo) LOC11407018 (mtr) LOC11410578 (mtr) LOC11443517 (mtr) LOC18094165 (ppo) LOC18096974 (ppo) LOC25500639 (mtr) LOC25500640 (mtr) LOC100776289 (gma) LOC100777730 (gma) LOC100785708 (gma) LOC100790168 (gma) LOC100790854 (gma) LOC100795733 (gma) LOC100804965 (gma) LOC101250434 (sly) MYC1 (sly) LOC101264068 (sly) LOC101265943 (sly) LOC101267164 (sly) LOC101267939 (sly) LOC102663214 (gma) LOC103827703 (bra) LOC103827709 (bra) LOC103827867 (bra) LOC103839572 (bra) LOC103839575 (bra) LOC103839580 (bra) LOC103855832 (bra) LOC103874758 (bra) LOC123050219 (tae) LOC123125866 (tae) LOC123181467 (tae) LOC123436178 (hvu)

Subcellular
localization
wolf

nucl 6, chlo 1, plas 1

(predict for NP_199495.1)

Subcellular
localization
TargetP

other 7

(predict for NP_199495.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for NIG1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248867_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248867_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248867_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	834727
Refseq ID (protein)	NP_199495.1

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