[←][→] ath   At5g46840 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
KEGG
Protein NP_001078722.1  NP_199496.1 
BLAST NP_001078722.1  NP_199496.1 
Orthologous [Ortholog page] LOC4334825 (osa)  LOC7456083 (ppo)  LOC11434958 (mtr)  LOC18094148 (ppo)  LOC100784494 (gma)  LOC100809622 (gma)  LOC101252314 (sly)  LOC103827700 (bra)  LOC123087507 (tae)  LOC123114418 (tae)  LOC123123950 (tae)  LOC123395191 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001078722.1)
nucl 9  (predict for NP_199496.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001078722.1)
other 7  (predict for NP_199496.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
Genes directly connected with AT5G46840 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.9 AT3G11450 DnaJ and Myb-like DNA-binding domain-containing protein [detail] 820318
9.9 AT5G06110 DnaJ and myb-like DNA-binding domain-containing protein [detail] 830498
9.7 CDC5 cell division cycle 5 [detail] 837506
8.9 IMB1 Transcription factor GTE6 [detail] 818055
8.6 TRM10 tRNA (guanine(9)-N1)-methyltransferase-like protein [detail] 834819
8.5 AT5G23590 DNAJ heat shock N-terminal domain-containing protein [detail] 832425
7.3 PYM partner of Y14-MAGO [detail] 837682
7.3 AT5G46020 28 kDa heat/acid-stable phosphoprotein-like protein [detail] 834642
6.6 DRIP1 DREB2A-interacting protein 1 [detail] 837188
6.6 ASHH1 SET domain group 26 [detail] 844005
Coexpressed
gene list		 [Coexpressed gene list for AT5G46840]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248869_at
248869_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248869_at
248869_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248869_at
248869_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834728      
Refseq ID (protein) NP_001078722.1 
NP_199496.1 


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