[←][→] ath   At5g47180 Gene
functional annotation
Function   Plant VAMP (vesicle-associated membrane protein) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (856 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO MF
KEGG
Protein NP_199529.1  NP_851144.1 
BLAST NP_199529.1  NP_851144.1 
Orthologous [Ortholog page] LOC4349306 (osa)  LOC7471658 (ppo)  LOC9270104 (osa)  LOC11428421 (mtr)  LOC18094566 (ppo)  LOC25493602 (mtr)  LOC100305949 (gma)  LOC100792882 (gma)  LOC100794270 (gma)  LOC100820122 (gma)  LOC101245870 (sly)  LOC101260955 (sly)  LOC103827664 (bra)  LOC103839543 (bra)  LOC103853790 (bra)  LOC123127882 (tae)  LOC123137754 (tae)  LOC123144974 (tae)  LOC123403578 (hvu) 
Subcellular
localization
wolf
golg 4,  nucl 2,  golg_plas 2,  cyto 1,  cysk 1,  nucl_plas 1  (predict for NP_199529.1)
golg 4,  nucl 2,  golg_plas 2,  cyto 1,  cysk 1,  nucl_plas 1  (predict for NP_851144.1)
Subcellular
localization
TargetP
other 8  (predict for NP_199529.1)
other 8  (predict for NP_851144.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath04145 Phagosome 2
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with AT5G47180 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.1 VAMP711 vesicle-associated membrane protein 711 [detail] 829347
5.7 NPSN13 Putative plant snare 13 [detail] 821008
5.6 GLX2-1 glyoxalase 2-1 [detail] 818944
5.2 RABA2D RAB GTPase homolog A2D [detail] 836033
5.1 AT5G09960 sorbin/SH3 domain protein [detail] 830857
5.0 AT4G38730 magnesium transporter, putative (DUF803) [detail] 830028
Coexpressed
gene list		 [Coexpressed gene list for AT5G47180]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248796_at
248796_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248796_at
248796_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248796_at
248796_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 834764      
Refseq ID (protein) NP_199529.1 
NP_851144.1 


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